English
Related papers

Related papers: Information flow through a model of the C. elegans…

200 papers

We study how the information flows in many-body dynamics governed by random quantum circuits and discover a rich set of dynamical phase transitions in this information flow. The phase transition points and their critical exponents are…

Quantum Physics · Physics 2024-02-14 J. -Z. Zhuang , Y. -K. Wu , L. -M. Duan

Caenorhabditis elegans (C. elegans) illustrated remarkable behavioral plasticities including complex non-associative and associative learning representations. Understanding the principles of such mechanisms presumably leads to constructive…

Neurons and Cognition · Quantitative Biology 2017-03-28 Ramin M. Hasani , Magdalena Fuchs , Victoria Beneder , Radu Grosu

Continual learning (CL) is a setting in which an agent has to learn from an incoming stream of data sequentially. CL performance evaluates the model's ability to continually learn and solve new problems with incremental available…

Machine Learning · Computer Science 2022-05-04 Josh Andle , Salimeh Yasaei Sekeh

Many daily activities and psychophysical experiments involve keeping multiple items in working memory. When items take continuous values (e.g., orientation, contrast, length, loudness) they must be stored in a continuous structure of…

Neurons and Cognition · Quantitative Biology 2021-12-21 Christopher J. Cueva , Adel Ardalan , Misha Tsodyks , Ning Qian

Recent whole-brain calcium imaging recordings of the nematode C. elegans have demonstrated that neural activity is dominated by dynamics on a low-dimensional manifold that can be clustered according to behavioral states. Despite progress in…

Neurons and Cognition · Quantitative Biology 2020-02-05 Megan Morrison , Charles Fieseler , J. Nathan Kutz

In this paper a model of neural circuit in the brain has been proposed which is composed of cyclic sub-circuits. A big loop has been defined to be consisting of a feed forward path from the sensory neurons to the highest processing area of…

Neurons and Cognition · Quantitative Biology 2007-06-16 Kaushik Majumdar

To survive in ever-changing environments, living organisms need to continuously combine the ongoing external inputs they receive, representing present conditions, with their dynamical internal state, which includes influences of past…

Neurons and Cognition · Quantitative Biology 2024-02-09 Maria Sol Vidal-Saez , Oscar Vilarroya , Jordi Garcia-Ojalvo

We show that dynamical gain modulation of neurons' stimulus response is described as an information-theoretic cycle that generates entropy associated with the stimulus-related activity from entropy produced by the modulation. To articulate…

Neurons and Cognition · Quantitative Biology 2017-12-29 Hideaki Shimazaki

We exploit the reduced space of C. elegans postures to develop a novel tracking algorithm which captures both simple shapes and also self-occluding coils, an important, yet unexplored, component of worm behavior. We apply our algorithm to…

Quantitative Methods · Quantitative Biology 2016-11-01 Onno D Broekmans , Jarlath B Rodgers , William S Ryu , Greg J Stephens

We investigate the performance of sparsely-connected networks of integrate-and-fire neurons for ultra-short term information processing. We exploit the fact that the population activity of networks with balanced excitation and inhibition…

Neurons and Cognition · Quantitative Biology 2007-05-23 Julien Mayor , Wulfram Gerstner

We model the neuronal circuit of the C.elegans soil worm in terms of Hindmarsh-Rose systems of ordinary differential equations, dividing its circuit into six communities pointed out by the walktrap and Louvain methods. Using the numerical…

Neurons and Cognition · Quantitative Biology 2016-11-03 Chris G. Antonopoulos , Athanasios S. Fokas , Tassos C. Bountis

Despite recent interest in reconstructing neuronal networks, complete wiring diagrams on the level of individual synapses remain scarce and the insights into function they can provide remain unclear. Even for Caenorhabditis elegans, whose…

Neurons and Cognition · Quantitative Biology 2011-02-07 Lav R. Varshney , Beth L. Chen , Eric Paniagua , David H. Hall , Dmitri B. Chklovskii

We present the Context-Content Uncertainty Principle (CCUP), a unified framework that models cognition as the directed flow of information between high-entropy context and low-entropy content. Inference emerges as a cycle of bidirectional…

Machine Learning · Statistics 2025-08-19 Xin Li

Striking progress has recently been made in understanding human cognition by analyzing how its neuronal underpinnings are engaged in different modes of information processing. Specifically, neural information can be decomposed into…

Neurons and Cognition · Quantitative Biology 2022-10-07 Alexandra M. Proca , Fernando E. Rosas , Andrea I. Luppi , Daniel Bor , Matthew Crosby , Pedro A. M. Mediano

Understanding the dynamical behavior of complex systems from their underlying network architectures is a long-standing question in complexity theory. Therefore, many metrics have been devised to extract network features like motifs,…

Neurons and Cognition · Quantitative Biology 2024-09-05 Bryant Avila , Pedro Augusto , David Phillips , Tommaso Gili , Manuel Zimmer , Hernán A. Makse

We introduce SIM-CE, an advanced, user-friendly modeling and simulation environment in Simulink for performing multi-scale behavioral analysis of the nervous system of Caenorhabditis elegans (C. elegans). SIM-CE contains an implementation…

Neurons and Cognition · Quantitative Biology 2017-03-28 Ramin M. Hasani , Victoria Beneder , Magdalena Fuchs , David Lung , Radu Grosu

The repertoire of neural activity patterns that a cortical network can produce constrains the network's ability to transfer and process information. Here, we measured activity patterns obtained from multi-site local field potential (LFP)…

Neurons and Cognition · Quantitative Biology 2010-12-17 Woodrow L. Shew , Hongdian Yang , Shan Yu , Rajarshi Roy , Dietmar Plenz

Animal locomotion is often subject to constraints arising from anatomical/physiological asymmetries. We use the nematode C.~elegans as a minimal model system to ask whether such constraints might shape locomotion patterns optimized during…

Neurons and Cognition · Quantitative Biology 2024-01-17 W. Mathijs Rozemuller , Steffen Werner , Antonio Carlos Costa , Liam O'Shaughnessy , Greg J. Stephens , Thomas S. Shimizu

We propose a new measure to estimate the direction of information flux in multivariate time series from complex systems. This measure, based on the slope of the phase spectrum (Phase Slope Index) has invariance properties that are important…