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Given a string of length $n$ that is composed of $r$ runs of letters from the alphabet $\{0,1,\ldots,\sigma{-}1\}$ such that $2 \le \sigma \le r$, we describe a data structure that, provided $r \le n / \log^{\omega(1)} n$, stores the string…

Data Structures and Algorithms · Computer Science 2018-02-27 José Fuentes-Sepúlveda , Juha Kärkkäinen , Dmitry Kosolobov , Simon J. Puglisi

Practical data structures for the edit-sensitive parsing (ESP) are proposed. Given a string S, its ESP tree is equivalent to a context-free grammar G generating just S, which is represented by a DAG. Using the succinct data structures for…

Data Structures and Algorithms · Computer Science 2015-03-17 Naoya Kishiue , Masaya Nakahara , Shirou Maruyama , Hiroshi Sakamoto

The representation of a dynamic ordered set of $n$ integer keys drawn from a universe of size $m$ is a fundamental data structuring problem. Many solutions to this problem achieve optimal time but take polynomial space, therefore preserving…

Data Structures and Algorithms · Computer Science 2020-03-27 Giulio Ermanno Pibiri , Rossano Venturini

The monotone minimal perfect hash function (MMPHF) problem is the following indexing problem. Given a set $S= \{s_1,\ldots,s_n\}$ of $n$ distinct keys from a universe $U$ of size $u$, create a data structure $DS$ that answers the following…

Data Structures and Algorithms · Computer Science 2022-07-26 Sepehr Assadi , Martin Farach-Colton , William Kuszmaul

We study the following one-way asymmetric transmission problem, also a variant of model-based compressed sensing: a resource-limited encoder has to report a small set $S$ from a universe of $N$ items to a more powerful decoder (server). The…

Data Structures and Algorithms · Computer Science 2018-07-30 Alexandr Andoni , Javad Ghaderi , Daniel Hsu , Dan Rubenstein , Omri Weinstein

This paper studies the \emph{subset sampling} problem. The input is a set $\mathcal{S}$ of $n$ records together with a function $\textbf{p}$ that assigns each record $v\in\mathcal{S}$ a probability $\textbf{p}(v)$. A query returns a random…

Data Structures and Algorithms · Computer Science 2023-07-24 Jinchao Huang , Sibo Wang

We show how universal codes can be used for solving some of the most important statistical problems for time series. By definition, a universal code (or a universal lossless data compressor) can compress any sequence generated by a…

Information Theory · Computer Science 2008-09-09 Boris Ryabko

Given a set of pattern strings $\mathcal{P}=\{P_1, P_2,\ldots P_k\}$ and a text string $S$, the classic dictionary matching problem is to report all occurrences of each pattern in $S$. We study the dictionary problem in the compressed…

Data Structures and Algorithms · Computer Science 2025-09-04 Philip Bille , Inge Li Gørtz , Simon J. Puglisi , Simon R. Tarnow

We develop a new approach for distributed distance computation in planar graphs that is based on a variant of the metric compression problem recently introduced by Abboud et al. [SODA'18]. One of our key technical contributions is in…

Data Structures and Algorithms · Computer Science 2019-12-30 Jason Li , Merav Parter

Given a string $S$, the \emph{compressed indexing problem} is to preprocess $S$ into a compressed representation that supports fast \emph{substring queries}. The goal is to use little space relative to the compressed size of $S$ while…

Data Structures and Algorithms · Computer Science 2018-01-10 Philip Bille , Mikko Berggren Ettienne , Inge Li Gørtz , Hjalte Wedel Vildhøj

Bit arrays, or bitmaps, are used to significantly speed up set operations in several areas, such as data warehousing, information retrieval, and data mining, to cite a few. However, bitmaps usually use a large storage space, thus requiring…

Data Structures and Algorithms · Computer Science 2015-03-14 Alessandro Colantonio , Roberto Di Pietro

We consider the problem of decompressing the Lempel--Ziv 77 representation of a string $S$ of length $n$ using a working space as close as possible to the size $z$ of the input. The folklore solution for the problem runs in $O(n)$ time but…

Data Structures and Algorithms · Computer Science 2019-11-05 Philip Bille , Mikko Berggren Ettienne , Travis Gagie , Inge Li Gørtz , Nicola Prezza

Today's graphs used in domains such as machine learning or social network analysis may contain hundreds of billions of edges. Yet, they are not necessarily stored efficiently, and standard graph representations such as adjacency lists waste…

Data Structures and Algorithms · Computer Science 2020-11-02 Maciej Besta , Dimitri Stanojevic , Tijana Zivic , Jagpreet Singh , Maurice Hoerold , Torsten Hoefler

Grammar compression is a general compression framework in which a string $T$ of length $N$ is represented as a context-free grammar of size $n$ whose language contains only $T$. In this paper, we focus on studying the limitations of…

Data Structures and Algorithms · Computer Science 2024-09-24 Rajat De , Dominik Kempa

We describe an algorithm for compressing a partially ordered set, or \emph{poset}, so that it occupies space matching the information theory lower bound (to within lower order terms), in the worst case. Using this algorithm, we design a…

Data Structures and Algorithms · Computer Science 2012-04-24 J. Ian Munro , Patrick K. Nicholson

In this paper we present a simple linear-time algorithm constructing a context-free grammar of size O(g log(N/g)) for the input string, where N is the size of the input string and g the size of the optimal grammar generating this string.…

Data Structures and Algorithms · Computer Science 2013-11-08 Artur Jeż

The $S$-gap shifts have a dynamically and combinatorially rich structure. Dynamical properties of the $S$-gap shift can be related to the properties of the set $S$. This interplay is particularly interesting when $S$ is not syndetic such as…

Dynamical Systems · Mathematics 2025-04-04 Cristian Ramirez , Amy Somers

Given the importance of the claim, we want to start by exposing the following consideration: this claim comes out more than a year after the article "Practical applications of Set Shaping Theory in Huffman coding" which reports the program…

Information Theory · Computer Science 2024-01-02 Aida Koch , Alix Petit , Christian Schmidt , Adrain Vdberg , Logan Lewis

Compressed inverted indices in use today are based on the idea of gap compression: documents pointers are stored in increasing order, and the gaps between successive document pointers are stored using suitable codes which represent smaller…

Information Retrieval · Computer Science 2012-06-20 Sebastiano Vigna

Various graphs such as web or social networks may contain up to trillions of edges. Compressing such datasets can accelerate graph processing by reducing the amount of I/O accesses and the pressure on the memory subsystem. Yet, selecting a…

Data Structures and Algorithms · Computer Science 2019-04-30 Maciej Besta , Torsten Hoefler