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A new simulated tempering method, which is referred to as simulated tempering umbrella sampling, for calculating the free energy of chemical reactions is proposed. First principles molecular dynamics simulations with this simulated…

Statistical Mechanics · Physics 2012-06-05 Yoshiharu Mori , Yuko Okamoto

o, m, p-xylene, p-dichlorobenzene, 1,2,4 trichlorobenzene and naphthalene were calibrated as condensates used in thermoporosimetry technique. Exponential relationships were found connecting the pore radii (Rp(nm)) and dT (C) on one side and…

Materials Science · Physics 2007-05-23 Nicolas Billamboz , Jean-Marie Nedelec , Manuel Grivet , Mohamed Baba

An accurate analytical parametrization for the exchange-correlation free energy of the homogeneous electron gas, including interpolation for partial spin-polarization, is derived via thermodynamic analysis of recent restricted path integral…

Chemical Physics · Physics 2015-06-17 Valentin V. Karasiev , Travis Sjostrom , James Dufty , S. B. Trickey

A melting transition for a system of hard spheres interacting by a repulsive Yukawa potential of DLVO form is studied. To find the location of the phase boundary, we propose a simple theory to calculate the free energies for the coexisting…

Condensed Matter · Physics 2015-06-25 P. S. Kuhn , A. Diehl , Y. Levin , M. C. Barbosa

We study the kinetics of crystallization in deeply supercooled liquid silicon employing computer simulations and the Stillinger-Weber three body potential. The free energy barriers to crystallisation are computed using umbrella sampling…

Soft Condensed Matter · Physics 2024-06-19 Yagyik Goswami , Vishwas V. Vasisht , Daan Frenkel , Pablo G. Debenedetti , Srikanth Sastry

The crystallisation of entangled polymers from their melt is investigated using computer simulation with a coarse-grained model. Using hybrid Monte Carlo simulations enables us to probe the behaviour of long polymer chains. We identify…

Soft Condensed Matter · Physics 2020-06-12 Xiaoliang Tang , Fucheng Tian , Tingyu Xu , Liangbin Li , Aleks Reinhardt

When studying high-dimensional dynamical systems such as macromolecules, quantum systems and polymers, a prime concern is the identification of the most probable states and their stationary probabilities or free energies. Often, these…

Data Analysis, Statistics and Probability · Physics 2013-01-01 Hao Wu , Frank Noé

Two-molecule theory refers to a class of microscopic, self-consistent field theories for the radial distribution function in classical molecular liquids. The version examined here can be considered as one of the very few formally derived…

Soft Condensed Matter · Physics 2024-11-20 Huimin Li , James P. Donley , David T. Wu , John G. Curro , Caleb A. Tormey

We study swelling and structural properties of ionic microgel suspensions within a comprehensive coarse-grained model that combines the polymeric and colloidal natures of microgels as permeable, compressible, charged spheres governed by…

Soft Condensed Matter · Physics 2018-06-07 Tyler J. Weyer , Alan R. Denton

Molecular process of crystallization from an oriented amorphous state was reproduced by molecular dynamics simulation for a realistic polyethylene model. Initial oriented amorphous state was obtained by uniaxial drawing an isotropic glassy…

Soft Condensed Matter · Physics 2009-11-07 Akira Koyama , Takashi Yamamoto , Koji Fukao , Yoshihisa Miyamoto

The shapes of liquid polystyrene (PS) droplets on viscoelastic polydimethylsiloxane (PDMS) substrates are investigated experimentally using atomic force microscopy for a range of droplet sizes and substrate elasticities. These shapes, which…

Soft Condensed Matter · Physics 2024-12-24 Khalil Remini , Leonie Schmeller , Dirk Peschka , Barbara Wagner , Ralf Seemann

Experimental results from mechanical viscoelastic as well as dielectric relaxation times were compared to theoretical expectations utilizing polymer scaling theory. Viscoelastic relaxation of a hydrogel at 33% relative humidity fabricated…

Soft Condensed Matter · Physics 2025-08-22 Jorge Monreal

We investigate crystal nucleation in supersaturated colloid suspensions using enhanced molecular dynamics simulations augmented with machine learning techniques. The simulations reveal that crystallization in the model colloidal system…

Soft Condensed Matter · Physics 2024-04-30 Vanessa J. Meraz , Ziyue Zou , Pratyush Tiwary

We address the problem of 2D particle density control. The particles are immersed in dielectric fluid and acted upon by manipulating an electric field. The electric field is controlled by an array of electrodes and used to bring the…

Optimization and Control · Mathematics 2022-09-09 Ion Matei , Johan de Kleer , Maksym Zhenirovskyy

The new mathematical framework based on the free energy of pure classical fluids presented in [R. D. Rohrmann, Physica A 347, 221 (2005)] is extended to multi-component systems to determine thermodynamic and structural properties of…

Statistical Mechanics · Physics 2008-11-26 R. D. Rohrmann , J. Zorec

Understanding the concept of rheology in polymer melts with dissolved gases like CO2 is crucial in development of high quality polymer foams which are commonly manufactured by foam extrusion processes. The crystallization and rheological…

Materials Science · Physics 2018-04-24 Daniel Raps , Hossein Goodarzi Hosseinabadi , Lutz Heymann , Thomas Köppl , Volker Altstädt

Variational methods are used to calculate structural and thermodynamical properties of a titrating polyelectrolyte in a discrete representation. The Coulomb interactions are emulated by harmonic repulsive forces, the force constants being…

chem-ph · Physics 2008-02-03 B. Jönsson , M. Ullner , C. Peterson , O. Sommelius , B. Söderberg

We calculate the `exact' potential corresponding to a one-dimensional interacting system of two electrons with a specific, tailored density. We use one-dimensional density-functional theory with a local-density approximation (LDA) on the…

Other Condensed Matter · Physics 2015-05-13 J. P. Coe , I. D'Amico

Metropolis simulations of all-atom models of peptides (i.e. small proteins) are considered. Inspired by the funnel picture of Bryngelson and Wolyness, a transformation of the updating probabilities of the dihedral angles is defined, which…

Statistical Mechanics · Physics 2009-11-10 Bernd A. Berg

We introduce an alternate model to describe twistons in crystalline polyethylene. The model couples torsional and longitudinal degrees of freedom and appears as an extension of a model that describes only the torsional motion. We find exact…

Condensed Matter · Physics 2009-10-31 D. Bazeia , E. Ventura