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Sustained high levels of blood glucose in type 2 diabetes (T2DM) can have disastrous long-term health consequences. An essential component of clinical interventions for T2DM is monitoring dietary intake to keep plasma glucose levels within…

Quantitative Methods · Quantitative Biology 2022-06-24 Zepeng Huo , Bobak J. Mortazavi , Theodora Chaspari , Nicolaas Deutz , Laura Ruebush , Ricardo Gutierrez-Osuna

There has been significant amount of research work on human activity classification relying either on Inertial Measurement Unit (IMU) data or data from static cameras providing a third-person view. Using only IMU data limits the variety and…

Computer Vision and Pattern Recognition · Computer Science 2019-06-03 Yantao Lu , Senem Velipasalar

High density neurostimulation systems are coming to market to help spinal cord injury patients by stimulating and recording neuromuscular function. However, the parameter space that these systems have to explore is exceedingly large, and…

Signal Processing · Electrical Eng. & Systems 2021-12-06 Dhruv Pai , Mentor Kip Ludwig

In Brain-Computer Interface (BCI) research, the detailed study of blinks is crucial. They can be considered as noise, affecting the efficiency and accuracy of decoding users' cognitive states and intentions, or as potential features,…

Neurons and Cognition · Quantitative Biology 2025-06-10 E. Guttmann-Flury , X. Sheng , X. Zhu

Calcium imaging using miniscopes are becoming increasingly popular in the neuroscience community with a multitude of microendoscope versions, lens systems and packages for analysis available as open source. Here we describe in detail how to…

Neurons and Cognition · Quantitative Biology 2021-10-05 Jessica Winne , George Nascimento , Ingrid Nogueira , Richardson N. Leao , Katarina E. Leao

Our knowledge of the sensory world is encoded by neurons in sequences of discrete, identical pulses termed action potentials or spikes. There is persistent controversy about the extent to which the precise timing of these spikes is relevant…

Neurons and Cognition · Quantitative Biology 2007-05-23 Ilya Nemenman , Geoffrey D. Lewen , William Bialek , Rob R. de Ruyter van Steveninck

Human's perception of the visual world is shaped by the stereo processing of 3D information. Understanding how the brain perceives and processes 3D visual stimuli in the real world has been a longstanding endeavor in neuroscience. Towards…

Computer Vision and Pattern Recognition · Computer Science 2025-08-06 Zhanqiang Guo , Jiamin Wu , Yonghao Song , Jiahui Bu , Weijian Mai , Qihao Zheng , Wanli Ouyang , Chunfeng Song

Generative AI has recently propelled the decoding of images from brain activity. How do these approaches scale with the amount and type of neural recordings? Here, we systematically compare image decoding from four types of non-invasive…

Image and Video Processing · Electrical Eng. & Systems 2025-01-29 Hubert Banville , Yohann Benchetrit , Stéphane d'Ascoli , Jérémy Rapin , Jean-Rémi King

In spite of the great progress in human motion prediction, it is still a challenging task to predict those aperiodic and complicated motions. We believe that to capture the correlations among human body components is the key to understand…

Computer Vision and Pattern Recognition · Computer Science 2021-07-13 Honghong Zhou , Caili Guo , Hao Zhang , Yanjun Wang

Biological studies reveal that neural circuits located at the spinal cord called central pattern generator (CPG) oscillates and generates rhythmic signals, which are the underlying mechanism responsible for rhythmic locomotion behaviors of…

Robotics · Computer Science 2023-05-15 Chuanyu Yang , Can Pu , Tianqi Wei , Cong Wang , Zhibin Li

Animals (especially humans) have an amazing ability to learn new tasks quickly, and switch between them flexibly. How brains support this ability is largely unknown, both neuroscientifically and algorithmically. One reasonable supposition…

Machine Learning · Computer Science 2017-06-23 Kevin T. Feigelis , Daniel L. K. Yamins

Over the last ten years, developments in whole-brain microscopy now allow for high-resolution imaging of intact brains of small rodents such as mice. These complex images contain a wealth of information, but many neuroscience laboratories…

Neurons and Cognition · Quantitative Biology 2021-02-24 Adam L Tyson , Troy W Margrie

The role of brain hemodynamics in neurodegenerative diseases cannot be fully assessed using existing imaging technologies. Recently, 2D Dynamic Ultrasound Localization Microscopy (DULM) has allowed for the quantitative mapping of the…

Robust humanoid locomotion requires accurate and globally consistent perception of the surrounding 3D environment. However, existing perception modules, mainly based on depth images or elevation maps, offer only partial and locally…

Robotics · Computer Science 2025-11-19 Qingwei Ben , Botian Xu , Kailin Li , Feiyu Jia , Wentao Zhang , Jingping Wang , Jingbo Wang , Dahua Lin , Jiangmiao Pang

Tracking many cells in time-lapse 3D image sequences is an important challenging task of bioimage informatics. Motivated by a study of brain-wide 4D imaging of neural activity in C. elegans, we present a new method of multi-cell tracking.…

Computer Vision and Pattern Recognition · Computer Science 2018-01-18 Osamu Hirose , Shotaro Kawaguchi , Terumasa Tokunaga , Yu Toyoshima , Takayuki Teramoto , Sayuri Kuge , Takeshi Ishihara , Yuichi Iino , Ryo Yoshida

Capturing challenging human motions is critical for numerous applications, but it suffers from complex motion patterns and severe self-occlusion under the monocular setting. In this paper, we propose ChallenCap -- a template-based approach…

Computer Vision and Pattern Recognition · Computer Science 2021-03-30 Yannan He , Anqi Pang , Xin Chen , Han Liang , Minye Wu , Yuexin Ma , Lan Xu

Toxoplasma gondii is the causative agent responsible for toxoplasmosis and serves as one of the most common parasites in the world. For a successful lytic cycle, T. gondii must traverse biological barriers in order to invade host cells, and…

Quantitative Methods · Quantitative Biology 2017-08-21 Mojtaba Sedigh Fazli , Stephen Andrew Vella , Silvia N. J. Moreno , Shannon Quinn

Rigid motion tracking is paramount in many medical imaging applications where movements need to be detected, corrected, or accounted for. Modern strategies rely on convolutional neural networks (CNN) and pose this problem as rigid…

Image and Video Processing · Electrical Eng. & Systems 2024-06-13 Benjamin Billot , Neel Dey , Daniel Moyer , Malte Hoffmann , Esra Abaci Turk , Borjan Gagoski , Ellen Grant , Polina Golland

The nervous system of the nematode soil worm Caenorhabditis elegans exhibits remarkable complexity despite the worm's small size. A general challenge is to better understand the relationship between neural organization and neural activity…

Neurons and Cognition · Quantitative Biology 2020-10-30 Alejandro Morales , Tom Froese

Lameness and gait irregularities are significant concerns in equine health management, affecting performance, welfare, and economic value. Traditional observational methods rely on subjective expert assessments, which can lead to…

Signal Processing · Electrical Eng. & Systems 2025-03-19 Benoît Savoini , Jonathan Bertolaccini , Stéphane Montavon , Michel Deriaz
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