Related papers: Online Computation of Abelian Runs

Enumerating the number of times one word occurs in another is a much-studied combinatorial subject. By utilizing a method that we call ``lexicographic extreme referencing'', we provide a formula for computing occurrences of one binary word…

The first two authors have shown [KK99,KK00] that the sum the exponent (and thus the number) of maximal repetitions of exponent at least 2 (also called runs) is linear in the length of the word. The exponent 2 in the definition of a run may…

We derive a simple efficient algorithm for Abelian periods knowing all Abelian squares in a string. An efficient algorithm for the latter problem was given by Cummings and Smyth in 1997. By the way we show an alternative algorithm for…

For $0<\delta <1$ a $\delta$-subrepetition in a word is a factor which exponent is less than~2 but is not less than $1+\delta$ (the exponent of the factor is the ratio of the factor length to its minimal period). The $\delta$-subrepetition…

The observed frequency of the longest proper prefix, the longest proper suffix, and the longest infix of a word $w$ in a given sequence $x$ can be used for classifying $w$ as avoided or overabundant. The definitions used for the expectation…

We consider the approximate pattern matching problem under edit distance. In this problem we are given a pattern $P$ of length $w$ and a text $T$ of length $n$ over some alphabet $\Sigma$, and a positive integer $k$. The goal is to find all…

Let $w$ be a string of length $n$. The problem of counting factors crossing a position - Problem 64 from the textbook ``125 Problems in Text Algorithms'' [Crochemore, Leqroc, and Rytter, 2021], asks to count the number $\mathcal{C}(w,k)$…

I present a parallel algorithm for exact probabilistic inference in Bayesian networks. For polytree networks with n variables, the worst-case time complexity is O(log n) on a CREW PRAM (concurrent-read, exclusive-write parallel…

In this note, we consider the problem of counting and verifying abelian border arrays of binary words. We show that the number of valid abelian border arrays of length \(n\) is \(2^{n-1}\). We also show that verifying whether a given array…

Fici and Saarela ([2]) conjectured that a binary word of length n contains at least $\lfloor n/4 \rfloor$ abelian squares. We slightly extend this conjecture and show that it holds in some special cases. In all other cases we have the…

We investigate abelian repetitions in Sturmian words. We exploit a bijection between factors of Sturmian words and subintervals of the unitary segment that allows us to study the periods of abelian repetitions by using classical results of…

The maximal sum of a sequence "A" of "n" real numbers is the greatest sum of all elements of any strictly contiguous and possibly empty subsequence of "A", and it can be computed in "O(n)" time by means of Kadane's algorithm. Letting "A^(x…

We study the abelian period sets of Sturmian words, which are codings of irrational rotations on a one-dimensional torus. The main result states that the minimum abelian period of a factor of a Sturmian word of angle $\alpha$ with continued…

A finite word $w$ is an abelian square if $w = xx^\prime$ with $x^\prime$ a permutation of $x$. In 1972, Entringer, Jackson, and Schatz proved that every binary word of length $k^2 + 6k$ contains an abelian square of length $\geq 2k$. We…

We study permutation (jumbled/Abelian) pattern matching over a general alphabet $\Sigma$. Given a pattern P of length m and a text T of length n, the classical task is to decide whether T contains a length-m substring whose Parikh vector…

The parameterized matching problem is a variant of string matching, which is to search for all parameterized occurrences of a pattern $P$ in a text $T$. In considering matching algorithms, the combinatorial natures of strings, especially…

The approximate period recovery problem asks to compute all $\textit{approximate word-periods}$ of a given word $S$ of length $n$: all primitive words $P$ ($|P|=p$) which have a periodic extension at edit distance smaller than $\tau_p$ from…

The abelian critical exponent of an infinite word $w$ is defined as the maximum ratio between the exponent and the period of an abelian power occurring in $w$. It was shown by Fici et al. that the set of finite abelian critical exponents of…

Analyzing patterns in a sequence of events has applications in text analysis, computer programming, and genomics research. In this paper, we consider the all-window-length analysis model which analyzes a sequence of events with respect to…

We give a new characterization of maximal repetitions (or runs) in strings based on Lyndon words. The characterization leads to a proof of what was known as the "runs" conjecture (Kolpakov \& Kucherov (FOCS '99)), which states that the…