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Subspace clustering aims to find groups of similar objects (clusters) that exist in lower dimensional subspaces from a high dimensional dataset. It has a wide range of applications, such as analysing high dimensional sensor data or DNA…

Machine Learning · Computer Science 2018-11-08 Minh Tuan Doan , Jianzhong Qi , Sutharshan Rajasegarar , Christopher Leckie

This work contributes to breast cancer sub-type classification using histopathological images. We utilize masked autoencoders (MAEs) to learn a self-supervised embedding tailored for computer vision tasks in this domain. This embedding…

Computer Vision and Pattern Recognition · Computer Science 2025-06-10 Annalisa Chiocchetti , Marco Dossena , Christopher Irwin , Luigi Portinale

Representation learning aims to extract meaningful lower-dimensional embeddings from data, known as representations. Despite its widespread application, there is no established definition of a ``good'' representation. Typically, the…

Machine Learning · Computer Science 2024-12-05 Mahalakshmi Sabanayagam , Omar Al-Dabooni , Pascal Esser

In this paper, we focus on the problem of identifying semantic factors of variation in large image datasets. By training a convolutional Autoencoder on the image data, we create encodings, which describe each datapoint at a higher level of…

Computer Vision and Pattern Recognition · Computer Science 2019-10-08 Ilja Manakov , Volker Tresp

Datasets from single-molecule experiments often reflect a large variety of molecular behaviour. The exploration of such datasets can be challenging, especially if knowledge about the data is limited and a priori assumptions about expected…

Data Analysis, Statistics and Probability · Physics 2020-04-06 Anton Vladyka , Tim Albrecht

Progress in automated microscopy and quantitative image analysis has promoted high-content screening (HCS) as an efficient drug discovery and research tool. While HCS offers to quantify complex cellular phenotypes from images at high…

Computer Vision and Pattern Recognition · Computer Science 2022-08-10 Umar Masud , Ethan Cohen , Ihab Bendidi , Guillaume Bollot , Auguste Genovesio

Recent advances in high-throughput sequencing technologies have enabled the extraction of multiple features that depict patient samples at diverse and complementary molecular levels. The generation of such data has led to new challenges in…

Genomics · Quantitative Biology 2022-09-14 Hakim Benkirane , Yoann Pradat , Stefan Michiels , Paul-Henry Cournède

Clustering is one of the most fundamental tasks in data analysis and machine learning. It is central to many data-driven applications that aim to separate the data into groups with similar patterns. Moreover, clustering is a complex…

Computer Vision and Pattern Recognition · Computer Science 2018-05-29 Elad Tzoreff , Olga Kogan , Yoni Choukroun

Missing data is a recurrent and challenging problem, especially when using machine learning algorithms for real-world applications. For this reason, missing data imputation has become an active research area, in which recent deep learning…

Machine Learning · Computer Science 2021-07-01 Simon Tihon , Muhammad Usama Javaid , Damien Fourure , Nicolas Posocco , Thomas Peel

Despite the recent developments that allowed neural networks to achieve impressive performance on a variety of applications, these models are intrinsically affected by the problem of overgeneralization, due to their partitioning of the full…

Artificial Intelligence · Computer Science 2020-02-11 Giacomo Spigler

Autoencoders are unsupervised machine learning circuits whose learning goal is to minimize a distortion measure between inputs and outputs. Linear autoencoders can be defined over any field and only real-valued linear autoencoder have been…

Neural and Evolutionary Computing · Computer Science 2014-03-19 Pierre Baldi , Zhiqin Lu

The paper proposes to employ deep convolutional neural networks (CNNs) to classify noncoding RNA (ncRNA) sequences. To this end, we first propose an efficient approach to convert the RNA sequences into images characterizing their…

Computer Vision and Pattern Recognition · Computer Science 2020-08-25 Brian McClannahan , Krushi Patel , Usman Sajid , Cuncong Zhong , Guanghui Wang

In this work we show that the classification performance of high-dimensional structural MRI data with only a small set of training examples is improved by the usage of dimension reduction methods. We assessed two different dimension…

Machine Learning · Computer Science 2015-05-27 Andreas Grünauer , Markus Vincze

Deep generative models have become increasingly effective at producing realistic images from randomly sampled seeds, but using such models for controllable manipulation of existing images remains challenging. We propose the Swapping…

Computer Vision and Pattern Recognition · Computer Science 2020-12-15 Taesung Park , Jun-Yan Zhu , Oliver Wang , Jingwan Lu , Eli Shechtman , Alexei A. Efros , Richard Zhang

The autoencoder is an unsupervised learning paradigm that aims to create a compact latent representation of data by minimizing the reconstruction loss. However, it tends to overlook the fact that most data (images) are embedded in a…

Machine Learning · Computer Science 2023-10-26 Alokendu Mazumder , Tirthajit Baruah , Bhartendu Kumar , Rishab Sharma , Vishwajeet Pattanaik , Punit Rathore

Visualization is a crucial step in exploratory data analysis. One possible approach is to train an autoencoder with low-dimensional latent space. Large network depth and width can help unfolding the data. However, such expressive networks…

Machine Learning · Computer Science 2023-07-03 Philipp Nazari , Sebastian Damrich , Fred A. Hamprecht

Breast cancer has long been a prominent cause of mortality among women. Diagnosis, therapy, and prognosis are now possible, thanks to the availability of RNA sequencing tools capable of recording gene expression data. Molecular subtyping…

Machine Learning · Computer Science 2021-11-11 Sheetal Rajpal , Virendra Kumar , Manoj Agarwal , Naveen Kumar

This paper proposes the use of deep autoencoders to compress the channel information in a \review{massive} multiple input and multiple output (MIMO) system. Although autoencoders perform lossy compression, they still have adequate…

Networking and Internet Architecture · Computer Science 2024-10-07 Faris B. Mismar , Aliye Özge Kaya

Subspace clustering aims to cluster unlabeled data that lies in a union of low-dimensional linear subspaces. Deep subspace clustering approaches based on auto-encoders have become very popular to solve subspace clustering problems. However,…

Machine Learning · Computer Science 2019-10-15 Shuai Yang , Wenqi Zhu , Yuesheng Zhu

Image captioning is a challenging task and attracting more and more attention in the field of Artificial Intelligence, and which can be applied to efficient image retrieval, intelligent blind guidance and human-computer interaction, etc. In…

Computer Vision and Pattern Recognition · Computer Science 2019-05-21 Yiyu Wang , Jungang Xu , Yingfei Sun , Ben He
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