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The limits of molecular dynamics (MD) simulations of macromolecules are steadily pushed forward by the relentless developments of computer architectures and algorithms. This explosion in the number and extent (in size and time) of MD…

We present a comprehensive global sensitivity analysis of two single-objective and two multi-objective state-of-the-art global optimization evolutionary algorithms as an algorithm configuration problem. That is, we investigate the quality…

Neural and Evolutionary Computing · Computer Science 2022-07-12 Varun Ojha , Jon Timmis , Giuseppe Nicosia

Latent space models (LSMs) are often used to analyze dynamic (time-varying) networks that evolve in continuous time. Existing approaches to Bayesian inference for these models rely on Markov chain Monte Carlo algorithms, which cannot handle…

Methodology · Statistics 2024-01-19 Joshua Daniel Loyal

This paper considers sequential adaptive estimation of sparse signals under a constraint on the total sensing effort. The advantage of adaptivity in this context is the ability to focus more resources on regions of space where signal…

Methodology · Statistics 2013-04-03 Dennis Wei , Alfred O. Hero

In this paper, a new computational framework based on the topology derivative concept is presented for evaluating stochastic topological sensitivities of complex systems. The proposed framework, designed for dealing with high dimensional…

Computational Engineering, Finance, and Science · Computer Science 2020-09-16 Xuchun Ren

This paper investigates the adaptive identification and prediction problems for stochastic dynamical systems with saturated observations, which arise from various fields in engineering and social systems, but up to now still lack…

Systems and Control · Electrical Eng. & Systems 2023-09-19 Lantian Zhang , Lei Guo

With the rapid growth of neuroimaging technologies, a great effort has been dedicated recently to investigate the dynamic changes in brain activity. Examples include time course calcium imaging and dynamic brain functional connectivity. In…

Methodology · Statistics 2020-08-31 Wei Hu , Tianyu Pan , Dehan Kong , Weining Shen

In this paper, a dual estimation methodology is developed for both time-varying parameters and states of a nonlinear stochastic system based on the Particle Filtering (PF) scheme. Our developed methodology is based on a concurrent…

Systems and Control · Computer Science 2016-06-29 Najmeh Daroogheh , Nader Meskin , Khashayar Khorasani

We present a stochastic first-order optimization method specialized for deep neural networks (DNNs), ECCO-DNN. This method models the optimization variable trajectory as a dynamical system and develops a discretization algorithm that…

Machine Learning · Computer Science 2023-10-24 Carmel Fiscko , Aayushya Agarwal , Yihan Ruan , Soummya Kar , Larry Pileggi , Bruno Sinopoli

Recent works leveraging Graph Neural Networks to approach graph matching tasks have shown promising results. Recent progress in learning discrete distributions poses new opportunities for learning graph matching models. In this work, we…

Machine Learning · Computer Science 2021-09-14 Linfeng Liu , Michael C. Hughes , Soha Hassoun , Li-Ping Liu

We discuss efficient Bayesian estimation of dynamic covariance matrices in multivariate time series through a factor stochastic volatility model. In particular, we propose two interweaving strategies (Yu and Meng, Journal of Computational…

Computation · Statistics 2019-08-07 Gregor Kastner , Sylvia Frühwirth-Schnatter , Hedibert Freitas Lopes

Graph filters leverage topological information to process networked data with existing methods mainly studying fixed graphs, ignoring that graphs often expand as nodes continually attach with an unknown pattern. The latter requires…

Machine Learning · Computer Science 2026-03-23 Zhan Gao , Bishwadeep Das , Elvin Isufi

Hierarchical parametric models consisting of observable and latent variables are widely used for unsupervised learning tasks. For example, a mixture model is a representative hierarchical model for clustering. From the statistical point of…

Machine Learning · Statistics 2014-01-24 Keisuke Yamazaki

Parametric sensitivity analysis is a critical component in the study of mathematical models of physical systems. Due to its simplicity, finite difference methods are used extensively for this analysis in the study of stochastically modeled…

Numerical Analysis · Mathematics 2020-09-03 David F. Anderson , Chaojie Yuan

In this paper, we propose a statistical aggregation method for agent-based models with heterogeneous agents that interact both locally on a complex adaptive network and globally on a market. The method combines three approaches from…

Theoretical Economics · Economics 2020-11-04 Jakob J. Kolb , Finn Müller-Hansen , Jürgen Kurths , Jobst Heitzig

Slow Feature Analysis (SFA) extracts slowly varying features from a quickly varying input signal. It has been successfully applied to modeling the visual receptive fields of the cortical neurons. Sufficient experimental results in…

Computer Vision and Pattern Recognition · Computer Science 2019-07-17 Zhang Zhang , Dacheng Tao

In uncertainty quantification, a stochastic modelling is often applied, where parameters are substituted by random variables. We investigate linear dynamical systems of ordinary differential equations with a quantity of interest as output.…

Numerical Analysis · Mathematics 2019-09-23 Roland Pulch , Akil Narayan

This paper considers optimization problems over networks where agents have individual objectives to meet, or individual parameter vectors to estimate, subject to subspace constraints that require the objectives across the network to lie in…

Multiagent Systems · Computer Science 2020-04-22 Roula Nassif , Stefan Vlaski , Ali H. Sayed

We recently presented a new "artificial intelligence" method for the analysis of high-resolution absorption spectra (Bainbridge and Webb, Mon. Not. R. Astron. Soc. 2017, 468,1639-1670). This new method unifies three established numerical…

Instrumentation and Methods for Astrophysics · Physics 2017-05-01 Matthew B. Bainbridge , John K. Webb

The paper proposes a method of damage detection in elastic materials, which is based on analyzing the time-dependent (dynamic) response of the material excited by an acoustic signal. A case study is presented consisting of experimental…

Signal Processing · Electrical Eng. & Systems 2019-12-24 Michael Oberguggenberger , Martin Schwarz