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We present the first fixed-parameter algorithm for constructing a tree-child phylogenetic network that displays an arbitrary number of binary input trees and has the minimum number of reticulations among all such networks. The algorithm…

Discrete Mathematics · Computer Science 2019-07-22 Leo van Iersel , Remie Janssen , Mark Jones , Yukihiro Murakami , Norbert Zeh

Thin spanning trees lie at the intersection of graph theory, approximation algorithms, and combinatorial optimization. They are central to the long-standing \emph{thin tree conjecture}, which asks whether every $k$-edge-connected graph…

Data Structures and Algorithms · Computer Science 2025-10-15 Mohit Daga

Frequent pattern mining is widely used to find ``important'' or ``interesting'' patterns in data. While it is not easy to mathematically define such patterns, maximal frequent patterns are promising candidates, as frequency is a natural…

Data Structures and Algorithms · Computer Science 2025-04-08 Giovanni Buzzega , Alessio Conte , Yasuaki Kobayashi , Kazuhiro Kurita , Giulia Punzi

The need to analyze information from streams arises in a variety of applications. One of its fundamental research directions is to mine sequential patterns over data streams. Current studies mine series of items based on the presence of the…

Databases · Computer Science 2022-04-12 Thomas Guyet , Wenbin Zhang , Albert Bifet

We present a new algorithm for subsequence matching in grammar compressed strings. Given a grammar of size $n$ compressing a string of size $N$ and a pattern string of size $m$ over an alphabet of size $\sigma$, our algorithm uses…

Data Structures and Algorithms · Computer Science 2014-06-06 Philip Bille , Patrick Hagge Cording , Inge Li Gørtz

A tree-packing is a collection of spanning trees of a graph. It has been a useful tool for computing the minimum cut in static, dynamic, and distributed settings. In particular, [Thorup, Comb. 2007] used them to obtain his dynamic min-cut…

Data Structures and Algorithms · Computer Science 2024-12-05 Tijn de Vos , Aleksander B. G. Christiansen

Optimization modeling is one of the most crucial but technical parts of operations research (OR). To automate the modeling process, existing works have leveraged large language models (LLMs), prompting them to break down tasks into steps…

Artificial Intelligence · Computer Science 2025-10-28 Haoyang Liu , Jie Wang , Yuyang Cai , Xiongwei Han , Yufei Kuang , Jianye Hao

We present a new method to count unrooted maps on the sphere up to orientation-preserving homeomorphisms. The principle, called tree-decomposition, is to deform a map into an arborescent structure whose nodes are occupied by constrained…

Combinatorics · Mathematics 2007-05-23 Eric Fusy

For many algorithmic problems on graphs of treewidth $t$, a standard dynamic programming approach gives an algorithm with time and space complexity $2^{\mathcal{O}(t)}\cdot n^{\mathcal{O}(1)}$. It turns out that when one considers the more…

Data Structures and Algorithms · Computer Science 2020-07-13 Jesper Nederlof , Michał Pilipczuk , Céline M. F. Swennenhuis , Karol Węgrzycki

Real-world data typically contain repeated and periodic patterns. This suggests that they can be effectively represented and compressed using only a few coefficients of an appropriate basis (e.g., Fourier, Wavelets, etc.). However, distance…

Machine Learning · Statistics 2014-05-26 Michail Vlachos , Nikolaos Freris , Anastasios Kyrillidis

A recent work shows how we can optimize a tree based mode of operation for a rate 1 hash function. In particular, an algorithm and a theorem are presented for selecting a good tree topology in order to optimize both the running time and the…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-04-15 Kevin Atighehchi

Many websites with an underlying database containing structured data provide the richest and most dense source of information relevant for topical data integration. The real data integration requires sustainable and reliable pattern…

Information Retrieval · Computer Science 2015-03-19 Z. Akbar , L. T. Handoko

Data mining is the task of discovering interesting, unexpected or valuable structures in large datasets and transforming them into an understandable structure for further use . Different approaches in the domain of data mining have been…

Databases · Computer Science 2020-09-21 Julie Bu Daher , Armelle Brun , Anne Boyer

High-utility itemset mining finds itemsets from a transaction database with utility no less than a fixed user-defined threshold. The utility of an itemset is defined as the sum of the utilities of its item. Several algorithms were proposed…

Data Structures and Algorithms · Computer Science 2019-11-19 Siddharth Dawar , Vikram Goyal , Debajyoti Bera

Subgraph matching is a fundamental problem in graph analysis with a wide range of applications. However, due to its inherent NP-hardness, enumerating subgraph matches efficiently on large real-world graphs remains highly challenging. Most…

Databases · Computer Science 2026-03-11 Linglin Yang , Xunbin Su , Lei Zou , Xiangyang Gou , Yinnian Lin

Cartesian tree matching is the problem of finding all substrings in a given text which have the same Cartesian trees as that of a given pattern. In this paper, we deal with Cartesian tree matching for the case of multiple patterns. We…

Data Structures and Algorithms · Computer Science 2019-11-06 Geonmo Gu , Siwoo Song , Simone Faro , Thierry Lecroq , Kunsoo Park

Graph mining applications analyze the structural properties of large graphs, and they do so by finding subgraph isomorphisms, which makes them computationally intensive. Existing graph mining techniques including both custom graph mining…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-12-09 Kasra Jamshidi , Keval Vora

Sequential pattern mining (SPM) with gap constraints (or repetitive SPM or tandem repeat discovery in bioinformatics) can find frequent repetitive subsequences satisfying gap constraints, which are called positive sequential patterns with…

Databases · Computer Science 2025-02-11 Yan Li , Zhulin Wang , Jing Liu , Lei Guo , Philippe Fournier-Viger , Youxi Wu , Xindong Wu

Tabular neural network (NN) has attracted remarkable attentions and its recent advances have gradually narrowed the performance gap with respect to tree-based models on many public datasets. While the mainstreams focus on calibrating NN to…

Machine Learning · Computer Science 2024-03-05 Xuan Li , Yun Wang , Bo Li

Property graphs often contain tree-shaped substructures, yet they are not captured by existing proposals for graph schemas; likewise, query languages and query engines offer little-to-no native support for managing them systematically. As a…

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