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For most of human history, we have not thought systematically about how and why we incorporate aspects of the natural world into our designs. The lack of a systematic approach has resulted in inconsistencies in motivations and methods that…

Robotics · Computer Science 2026-05-20 Margaret J. Zhang , Justin Ting , Talia Y. Moore

Biochemical processes typically involve huge numbers of individual reversible steps, each with its own dynamical rate constants. For example, kinetic proofreading processes rely upon numerous sequential reactions in order to guarantee the…

Molecular Networks · Quantitative Biology 2009-12-28 Golan Bel , Brian Munsky , Ilya Nemenman

Matching animal-like flexibility in recognition and the ability to quickly incorporate new information remains difficult. Limits are yet to be adequately addressed in neural models and recognition algorithms. This work proposes a…

Computer Vision and Pattern Recognition · Computer Science 2012-06-26 Tsvi Achler

A striking difference between brain-inspired neuromorphic processors and current von Neumann processors architectures is the way in which memory and processing is organized. As Information and Communication Technologies continue to address…

Neural and Evolutionary Computing · Computer Science 2017-11-08 Giacomo Indiveri , Shih-Chii Liu

Biotechnology offers many opportunities for the sustainable manufacturing of valuable products. The toolbox to optimize bioprocesses includes \textit{extracellular} process elements such as the bioreactor design and mode of operation,…

Systems and Control · Electrical Eng. & Systems 2023-02-07 Sebastián Espinel-Ríos , Bruno Morabito , Johannes Pohlodek , Katja Bettenbrock , Steffen Klamt , Rolf Findeisen

Biology is perhaps the most complex of the sciences, given the incredible variety of chemical species that are interconnected in spatial and temporal pathways that are daunting to understand. Their interconnections lead to emergent…

Biological Physics · Physics 2023-09-11 Henry V. Jakubowski , Henry Agnew , Bartholomew E. Jardine , Herbert M. Sauro

The ability to learn and respond to recurrent events depends on the capacity to remember transient biological signals received in the past. Moreover, it may be desirable to remember or ignore these transient signals conditioned upon other…

Molecular Networks · Quantitative Biology 2010-09-17 Georg Fritz , Nicolas E. Buchler , Terence Hwa , Ulrich Gerland

In recent years, bio-inspired optimization methods, which mimic biological processes to solve complex problems, have gained popularity in recent literature. The proliferation of proposals prove the growing interest in this field. The…

Artificial Intelligence · Computer Science 2024-04-18 Daniel Molina , Javier Poyatos , Javier Del Ser , Salvador García , Amir Hussain , Francisco Herrera

Signaling pathways are responsible for the regulation of cell processes, such as monitoring the external environment, transmitting information across membranes, and making cell fate decisions. Given the increasing amount of biological data…

Molecular Networks · Quantitative Biology 2020-04-07 Daniel Inostroza , Cecilia Hernández , Diego Seco , Gonzalo Navarro , Alvaro Olivera-Nappa

The main objective of the research is to introduce a biologically inspired execution framework for workflow systems under threat due to some intrusion attack. Usually vulnerable systems need to be stop and put into wait state, hence to…

Cryptography and Security · Computer Science 2009-11-03 Sohail Safdar , Mohd. Fadzil B. Hassan , Muhammad Aasim Qureshi , Rehan Akbar

In studying primate vision, a large body of work focuses on the first feedforward sweep. During this initial time window, information is thought to pass through ventral stream regions in a stage-like fashion in an effort to extract…

Neurons and Cognition · Quantitative Biology 2026-04-15 Daniel Anthes , Sushrut Thorat , Anna Mitola , Paolo Papale , Peter König , Tim C Kietzmann

Various biological system models have been proposed in systems biology, which are based on the complex biological reactions kinetic of various components. These models are not practical because we lack of kinetic information. In this paper,…

Quantitative Methods · Quantitative Biology 2011-02-19 Weidong Huang , Chundu Wu , Bingjia Xiao , Weidong Xia

A food composition knowledge base, which stores the essential phyto-, micro-, and macro-nutrients of foods is useful for both research and industrial applications. Although many existing knowledge bases attempt to curate such information,…

Computation and Language · Computer Science 2023-01-27 Jason Youn , Fangzhou Li , Ilias Tagkopoulos

In recent years, the interdisciplinary research between information science and neuroscience has been a hotspot. In this paper, based on recent biological findings, we proposed a new model to mimic visual information processing, motor…

Robotics · Computer Science 2016-03-09 Wei Wu , Hong Qiao , Jiahao Chen , Peijie Yin , Yinlin Li

Biological organisms adapt to changes by processing informations from different sources, most notably from their ancestors and from their environment. We review an approach to quantify these informations by analyzing mathematical models of…

Populations and Evolution · Quantitative Biology 2016-03-23 Olivier Rivoire

Understanding the function of network motifs in an attempt to gain insight into how their combinations create larger reaction networks that drive cellular functions, has been a longstanding pursuit of systems biology. One specific objective…

Molecular Networks · Quantitative Biology 2025-09-24 Nguyen H. N. Tran , Federico Frascoli , Andrew H. A. Clayton

The emergence of "big data" offers unprecedented opportunities for not only accelerating scientific advances but also enabling new modes of discovery. Scientific progress in many disciplines is increasingly enabled by our ability to examine…

Computers and Society · Computer Science 2017-07-03 Vasant G. Honavar , Mark D. Hill , Katherine Yelick

Nature is often used to inspire solutions for complex engineering problems, but achieving its full potential is challenging due to difficulties in discovering relevant analogies and synthesizing from them. Here, we present an end-to-end…

Human-Computer Interaction · Computer Science 2023-12-19 Hyeonsu B. Kang , David Chuan-En Lin , Nikolas Martelaro , Aniket Kittur , Yan-Ying Chen , Matthew K. Hong

Synthetic Biology is the new engineering-based approach to biology that includes applications of designing complex biological devices. At present, it is not yet clear what will emerge as the defining principles of Synthetic Biology. One…

Quantitative Methods · Quantitative Biology 2011-03-30 A. X. C. N. Valente , Stephen S. Fong

Innovation in synthetic biology often still depends on large-scale experimental trial-and-error, domain expertise, and ingenuity. The application of rational design engineering methods promise to make this more efficient, faster, cheaper…

Molecular Networks · Quantitative Biology 2021-08-18 Robyn P. Araujo , Sean T. Vittadello , Michael P. H. Stumpf
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