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Related papers: Reactive Programming of Simulations in Physics

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RNA function is deeply intertwined with its conformational dynamics. In this review, we survey recent advances in the use of atomistic molecular dynamics simulations to characterize RNA dynamics in diverse contexts, including isolated…

Chemical Physics · Physics 2026-03-06 Olivier Languin-Cattoën , Giovanni Bussi

We describe some progress towards a new common framework for model driven engineering, based on behavioral programming. The tool we have developed unifies almost all of the work done in behavioral programming so far, under a common set of…

Software Engineering · Computer Science 2018-06-05 Michael Bar-Sinai , Gera Weiss , Reut Shmuel

The objective of this article is to report the parallel implementation of the 3D molecular dynamic simulation code for laser-cluster interactions. The benchmarking of the code has been done by comparing the simulation results with some of…

Computational Physics · Physics 2015-06-16 Amol R. Holkundkar

The increasing share of volatile renewable electricity production motivates demand response. Substantial potential for demand response is offered by flexible processes and their local multi-energy supply systems. Simultaneous optimization…

Optimization and Control · Mathematics 2024-01-10 Florian Joseph Baader , Philipp Althaus , André Bardow , Manuel Dahmen

Reward machines (RMs) provide a structured way to specify non-Markovian rewards in reinforcement learning (RL), thereby improving both expressiveness and programmability. Viewed more broadly, they separate what is known about the…

Machine Learning · Computer Science 2025-08-21 Daniel Ajeleye , Ashutosh Trivedi , Majid Zamani

Active matter refers to systems composed of self-propelled entities that consume energy to produce motion, exhibiting complex non-equilibrium dynamics that challenge traditional models. With the rapid advancements in machine learning,…

Soft Condensed Matter · Physics 2025-09-04 Wenjie Cai , Gongyi Wang , Yu Zhang , Xiang Qu , Zihan Huang

Learning long-term dynamics models is the key to understanding physical common sense. Most existing approaches on learning dynamics from visual input sidestep long-term predictions by resorting to rapid re-planning with short-term models.…

Computer Vision and Pattern Recognition · Computer Science 2021-04-06 Haozhi Qi , Xiaolong Wang , Deepak Pathak , Yi Ma , Jitendra Malik

The goal of inductive logic programming is to induce a logic program (a set of logical rules) that generalises training examples. Inducing programs with many rules and literals is a major challenge. To tackle this challenge, we introduce an…

Machine Learning · Computer Science 2023-08-21 Andrew Cropper , Céline Hocquette

Traditional Answer Set Programming (ASP) rests upon one-shot solving. A logic program is fed into an ASP system and its stable models are computed. The high practical relevance of dynamic applications led to the development of multi-shot…

Programming Languages · Computer Science 2015-11-05 Martin Gebser , Phillip Obermeier , Torsten Schaub

PolyMAPS is an open-source library that helps researchers to initialize LAMMPS molecular dynamics simulations. It introduces an integrated workflow by combining preparation, launching, visualization, and analysis into a single Jupyter…

Chemical Physics · Physics 2023-11-14 Xiaoli Yan , Santanu Chaudhuri

Incorporating computer programming exercises in introductory physics is a delicate task that involves a number of choices that may have a strong affect on student learning. We present an approach that speaks to a number of common concerns…

Real-time control systems often require dedicated hardware and software, including real-time operating systems, while many systems are available for off-line computing, mainly based on standard system units (PCs), standard network…

Instrumentation and Detectors · Physics 2007-05-23 F. Acernese , F. Barone , R. De Rosa , R. Esposito , P. Mastroserio , L. Milano , S. Pardi , K. Qipiani , F. Silvestri , G. Spadaccini

We present our ongoing work aimed at accelerating a particle-resolved direct numerical simulation model designed to study aerosol-cloud-turbulence interactions. The dynamical model consists of two main components - a set of fluid dynamics…

We propose active object languages as a development tool for formal system models of distributed systems. Additionally to a formalization based on a term rewriting system, we use established Software Engineering concepts, including software…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-10-08 Eduard Kamburjan , Reiner Hähnle

Probabilistic programming is related to a compositional approach to stochastic modeling by switching from discrete to continuous time dynamics. In continuous time, an operator-algebra semantics is available in which processes proceeding in…

Artificial Intelligence · Computer Science 2012-12-05 Eric Mjolsness

The molecular simulations solve the equation of motion of molecular systems, making 3D shapes of molecules four-dimensional by adding the time coordinate. These methods have a great potential in drug discovery because they can realistically…

Biomolecules · Quantitative Biology 2023-01-19 Dalibor Trapl , Vojtěch Spiwok

Differentiable programming, enabled by automatic differentiation (AD), provides a robust framework for gradient-based optimization in computational plasma physics. While optimization is often only used towards design, we demonstrate that it…

Plasma Physics · Physics 2026-03-13 A. S. Joglekar , A. G. R. Thomas , A. L. Milder , K. G. Miller , J. P. Palastro , D. H. Froula

In this work, we present the recursive camera-painting approach to obtain painterly smudging in real-time rendering applications. We have implemented recursive camera painting as both a GPU-based ray-tracing and in a Virtual Reality game…

Graphics · Computer Science 2023-12-20 Ergun Akleman , Cassie Mullins , Christopher Morrison , David Oh

Studying physics of very large scale like the solar system is difficult in real life, using telescope on clear skies over years. We are probably a world first to create four well designed gravity computer models to serve as powerful…

Physics Education · Physics 2013-03-04 Loo Kang Wee , Giam Hwee Goh , Charles Chew

RA is a software package that couples machine learning with formal reasoning in an attempt to find the laws that generate the empirical data that it has been given access to. A brief outline of RA in its initial stage of development is…

Logic in Computer Science · Computer Science 2024-05-22 G. Pantelis