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Graphical models are ubiquitous tools to describe the interdependence between variables measured simultaneously such as large-scale gene or protein expression data. Gaussian graphical models (GGMs) are well-established tools for…

Methodology · Statistics 2020-01-09 Nilabja Guha , Veera Baladandayuthapani , Bani K. Mallick

Active contour models based on partial differential equations have proved successful in image segmentation, yet the study of their geometric formulation on arbitrary geometric graphs is still at an early stage. In this paper, we introduce…

Computer Vision and Pattern Recognition · Computer Science 2016-10-25 Christos Sakaridis , Kimon Drakopoulos , Petros Maragos

In many inverse problems, model parameters cannot be precisely determined from observational data. Bayesian inference provides a mechanism for capturing the resulting parameter uncertainty, but typically at a high computational cost. This…

Computation · Statistics 2019-03-28 Matthew Parno , Tarek Moselhy , Youssef Marzouk

Undirected graphs can be used to describe matrix variate distributions. In this paper, we develop new methods for estimating the graphical structures and underlying parameters, namely, the row and column covariance and inverse covariance…

Machine Learning · Statistics 2014-05-26 Shuheng Zhou

In this work, Transition Probability Matrix (TPM) is proposed as a new method for extracting the features of nodes in the graph. The proposed method uses random walks to capture the connectivity structure of a node's close neighborhood. The…

Machine Learning · Computer Science 2023-03-07 Sarmad N. Mohammed , Semra Gündüç

In this paper we present a novel inference methodology to perform Bayesian inference for spatiotemporal Cox processes where the intensity function depends on a multivariate Gaussian process. Dynamic Gaussian processes are introduced to…

Methodology · Statistics 2019-03-12 Flávio B. Gonçalves , Dani Gamerman

Probabilistic graphical models (PGMs) are powerful tools for representing statistical dependencies through graphs in high-dimensional systems. However, they are limited to pairwise interactions. In this work, we propose the simplicial…

Machine Learning · Statistics 2025-10-16 Lorenzo Marinucci , Gabriele D'Acunto , Paolo Di Lorenzo , Sergio Barbarossa

Full Bayesian computational inference for model determination in undirected graphical models is currently restricted to decomposable graphs, except for problems of very small scale. In this paper we develop new, more efficient methodology…

Computation · Statistics 2012-06-05 Peter J. Green , Alun Thomas

Attack graphs are a powerful tool for security risk assessment by analysing network vulnerabilities and the paths attackers can use to compromise network resources. The uncertainty about the attacker's behaviour makes Bayesian networks…

Cryptography and Security · Computer Science 2016-11-07 Luis Muñoz-González , Daniele Sgandurra , Martín Barrère , Emil Lupu

In this paper we define a quantum stochastic walk on arbitrary directed graph with super-diffusive propagation on a line graph. Our model is based on global environment interaction QSW, which is known to have ballistic propagation. However…

Quantum Physics · Physics 2017-12-21 Krzysztof Domino , Adam Glos , Mateusz Ostaszewski

We describe a technique to determine the automorphism group of a geometrically represented graph, by understanding the structure of the induced action on all geometric representations. Using this, we characterize automorphism groups of…

Combinatorics · Mathematics 2015-08-05 Pavel Klavík , Peter Zeman

Bayesian estimation of Gaussian graphical models has proven to be challenging because the conjugate prior distribution on the Gaussian precision matrix, the G-Wishart distribution, has a doubly intractable partition function. Recent…

Neurons and Cognition · Quantitative Biology 2014-09-10 Max Hinne , Alex Lenkoski , Tom Heskes , Marcel van Gerven

Path integrals constitute powerful representations for both quantum and stochastic dynamics. Yet despite many decades of intensive studies, there is no consensus on how to formulate them for dynamics in curved space, or how to make them…

Statistical Mechanics · Physics 2022-04-27 Mingnan Ding , Xiangjun Xing

Daily internet communication relies heavily on tree-structured graphs, embodied by popular data formats such as XML and JSON. However, many recent generative (probabilistic) models utilize neural networks to learn a probability distribution…

Machine Learning · Computer Science 2024-08-20 Milan Papež , Martin Rektoris , Tomáš Pevný , Václav Šmídl

D. Wilson~\cite{[Wi]} in the 1990's described a simple and efficient algorithm based on loop-erased random walks to sample uniform spanning trees and more generally weighted trees or forests spanning a given graph. This algorithm provides a…

Probability · Mathematics 2018-08-29 L. Avena , F. Castell , A. Gaudilliere , C. Melot

Real-world road networks have an approximate scale-invariance property; can one devise mathematical models of random networks whose distributions are {\em exactly} invariant under Euclidean scaling? This requires working in the continuum…

Probability · Mathematics 2015-06-04 David J. Aldous

We derive an explicit formula for the fundamental solution $K_{T_{q+1}}(x,x_{0};t)$ to the discrete-time diffusion equation on the $(q+1)$-regular tree $T_{q+1}$ in terms of the discrete $I$-Bessel function. We then use the formula to…

Probability · Mathematics 2023-03-27 Carlos A. Cadavid , Paulina Hoyos , Jay Jorgenson , Lejla Smajlović , Juan D. Vélez

The Mapper algorithm from topological data analysis constructs a graph summarizing the shape of a high-dimensional dataset, and groups of data points identified within this graph are widely interpreted as evidence of distinct subtypes.…

Methodology · Statistics 2026-04-21 Chad M. Topaz

The problem of how to estimate diffusion on a graph effectively is of importance both theoretically and practically. In this paper, we make use of two widely studied indices, geodesic distance and mean first-passage time ($MFPT$) for random…

Combinatorics · Mathematics 2019-10-17 Fei Ma , Xiaomin Wang , Ping Wang

Extrinsic Gaussian process regression methods, such as wrapped Gaussian process, have been developed to analyze manifold data. However, there is a lack of intrinsic Gaussian process methods for studying complex data with manifold-valued…

Machine Learning · Statistics 2025-02-11 Zhanfeng Wang , Xinyu Li , Hao Ding , Jian Qing Shi