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Quantitative imaging biomarkers (QIB) are extracted from medical images in radiomics for a variety of purposes including noninvasive disease detection, cancer monitoring, and precision medicine. The existing methods for QIB extraction tend…

Methodology · Statistics 2021-03-23 ShengLi Tzeng , Jun Zhu , Amy Weisman , Tyler Bradshaw , Robert Jeraj

Ultrasound computed tomography (USCT) is an emerging imaging modality for breast imaging that can produce quantitative images that depict the acoustic properties of tissues. Computer-simulation studies, also known as virtual imaging trials,…

Medical Physics · Physics 2022-06-24 Fu Li , Umberto Villa , Seonyeong Park , Mark A. Anastasio

Deploying LLMs on edge devices presents serious technical challenges. Memory elasticity is crucial for edge devices with unified memory, where memory is shared and fluctuates dynamically. Existing solutions suffer from either poor…

Artificial Intelligence · Computer Science 2025-01-14 Yuji Chai , Mujin Kwen , David Brooks , Gu-Yeon Wei

This work introduces a new software package `Sesame' for the numerical computation of classical semiconductor equations. It supports 1 and 2-dimensional systems and provides tools to easily implement extended defects such as grain…

Applied Physics · Physics 2019-05-01 Benoit Gaury , Yubo Sun , Peter Bermel , Paul M. Haney

We present a new approach to the simulation and analysis of immune system behavior. The simulations that can be done with our software package called SIMMUNE are based on immunological data that describe the behavior of immune system agents…

Multiagent Systems · Computer Science 2007-05-23 M. Meier-Schellersheim , G. Mack

We present a software tool-set which combines the theoretical, optimal control view of quantum devices with the practical operation and characterization tasks required for quantum computing. In the same framework, we perform model-based…

Quantum Physics · Physics 2025-03-11 Anurag Saha Roy , Kevin Pack , Nicolas Wittler , Shai Machnes

Decision making in uncertain scenarios is an ubiquitous challenge in real world systems. Tools to deal with this challenge include simulations to gather information and statistical emulation to quantify uncertainty. The machine learning…

Machine Learning · Computer Science 2021-10-27 Andrei Paleyes , Mark Pullin , Maren Mahsereci , Cliff McCollum , Neil D. Lawrence , Javier Gonzalez

Quasi Static Elasticity Imaging (QSEI) aims to computationally reconstruct the inhomogeneous distribution of the elastic modulus using a measured displacement field. QSEI is a well-established imaging modality used in medical imaging for…

Computational Physics · Physics 2018-02-27 Danny Smyl , Sven Bossuyt , Dong Liu

To bridge the gap between limited hardware access and the huge demand for experiments for Noisy Intermediate-Scale Quantum (NISQ) computing system study, a simulator which can capture the modeling of both the quantum processor and its…

Quantum Physics · Physics 2019-05-08 Gushu Li , Yufei Ding , Yuan Xie

The complexity of biological systems, governed by molecular interactions across hierarchical scales, presents a challenge for computational modeling. While advances in multiomic profiling have enabled precise measurements of biological…

Quantum Physics · Physics 2025-06-18 Michael Kubal , Sonika Johri

Multiplex tissue immunostaining is a technology of growing relevance as it can capture in situ the complex interactions existing between the elements of the tumor microenvironment. The existence and availability of large, annotated image…

Computer Vision and Pattern Recognition · Computer Science 2021-03-09 Daniel Jiménez-Sánchez , Mikel Ariz , Carlos Ortiz-de-Solórzano

Histopathological staining of human tissue is essential for disease diagnosis. Recent advances in virtual tissue staining technologies using artificial intelligence (AI) alleviate some of the costly and tedious steps involved in traditional…

Image and Video Processing · Electrical Eng. & Systems 2025-06-17 Luzhe Huang , Yuzhu Li , Nir Pillar , Tal Keidar Haran , William Dean Wallace , Aydogan Ozcan

Trapped-Ion (TI) technology offers potential breakthroughs for Noisy Intermediate Scale Quantum (NISQ) computing. TI qubits offer extended coherence times and high gate fidelity, making them appealing for large-scale NISQ computers.…

Quantum Physics · Physics 2024-02-20 Cheng Chu , Zhenxiao Fu , Yilun Xu , Gang Huang , Hausi Muller , Fan Chen , Lei Jiang

Solvent plays an essential role in a variety of chemical, physical, and biological processes that occur in the solution phase. The reference interaction site model (RISM) and its three-dimensional extension (3D-RISM) serve as powerful…

Chemical Physics · Physics 2024-03-05 Yutaka Maruyama , Nori Yoshida

Recent advancements in image quality assessment (IQA), driven by sophisticated deep neural network designs, have significantly improved the ability to approach human perceptions. However, most existing methods are obsessed with fitting the…

Computer Vision and Pattern Recognition · Computer Science 2025-08-26 Shunyu Yao , Ming Liu , Zhilu Zhang , Zhaolin Wan , Zhilong Ji , Jinfeng Bai , Wangmeng Zuo

As cosmological simulations and their associated software become increasingly complex, physicists face the challenge of searching through vast amounts of literature and user manuals to extract simulation parameters from dense academic…

Instrumentation and Methods for Astrophysics · Physics 2025-07-21 Xiaowen Zhang , Zhenyu Bi , Patrick Lachance , Xuan Wang , Tiziana Di Matteo , Rupert A. C. Croft

Quantization-Aware Training from scratch has emerged as a promising approach for building efficient large language models (LLMs) with extremely low-bit weights (sub 2-bit), which can offer substantial advantages for edge deployment.…

Machine Learning · Computer Science 2026-02-27 Wenzheng Zhang , Bingzheng Liu , Yang Hu , Xiaoying Bai , Wentao Zhang , Bin Cui

The Imaging Computational Microscope (ICM) is a suite of computational tools for automated analysis of functional imaging data that runs under the cross-platform MATLAB environment (The Mathworks, Inc.). ICM uses a semi-supervised…

Neurons and Cognition · Quantitative Biology 2015-02-26 E. Paxon Frady , William B. Kristan

We propose a software platform that integrates methods and tools for multi-objective parameter auto- tuning in tissue image segmentation workflows. The goal of our work is to provide an approach for improving the accuracy of nucleus/cell…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-10-09 Luis F. R. Taveira , Tahsin Kurc , Alba C. M. A. Melo , Jun Kong , Erich Bremer , Joel H. Saltz , George Teodoro

Diffusion models have demonstrated exceptional generative capabilities but are computationally intensive, posing significant challenges for deployment in resource-constrained or latency-sensitive environments. Quantization offers an…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Jiaji Zhang , Ruichao Sun , Hailiang Zhao , Jiaju Wu , Peng Chen , Hao Li , Yuying Liu , Kingsum Chow , Gang Xiong , Shuiguang Deng
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