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Active biological flow networks pervade nature and span a wide range of scales, from arterial blood vessels and bronchial mucus transport in humans to bacterial flow through porous media or plasmodial shuttle streaming in slime molds.…

Biological Physics · Physics 2016-07-28 Francis G. Woodhouse , Aden Forrow , Joanna B. Fawcett , Jörn Dunkel

We propose a novel model-selection method for dynamic networks. Our approach involves training a classifier on a large body of synthetic network data. The data is generated by simulating nine state-of-the-art random graph models for dynamic…

Social and Information Networks · Computer Science 2024-05-28 Lourens Touwen , Doina Bucur , Remco van der Hofstad , Alessandro Garavaglia , Nelly Litvak

An integro-differential equation on a tree graph is used to model the evolution and spatial distribution of a population of organisms in a river network. Individual organisms become mobile at a constant rate, and disperse according to an…

Populations and Evolution · Quantitative Biology 2011-04-01 Jorge M Ramirez

We consider the logistic metapopulation model over a stream network and use the metapopulation growth rate and the total biomass (of the positive equilibrium) as metrics for different aspects of population persistence. Our objective is to…

We study a simple model in which the growth of a network is determined by the location of one or more random walkers. Depending on walker speed, the model generates a spectrum of structures situated between well-known limiting cases. We…

Physics and Society · Physics 2020-01-27 Robert J. H. Ross , Charlotte Strandkvist , Walter Fontana

We evolve network topology of an asymmetrically connected threshold network by a simple local rewiring rule: quiet nodes grow links, active nodes lose links. This leads to convergence of the average connectivity of the network towards the…

Disordered Systems and Neural Networks · Physics 2009-10-31 Stefan Bornholdt , Thimo Rohlf

Large-scale structural patterns commonly occur in network models of complex systems including a skewed node degree distribution and small-world topology. These patterns suggest common organizational constraints and similar functional…

Populations and Evolution · Quantitative Biology 2011-04-04 Stuart R. Borrett , Brian D. Fath , Bernard C. Patten

We propose a modeling framework for growing multiplexes where a node can belong to different networks. We define new measures for multiplexes and we identify a number of relevant ingredients for modeling their evolution such as the coupling…

Physics and Society · Physics 2013-08-01 Vincenzo Nicosia , Ginestra Bianconi , Vito Latora , Marc Barthelemy

A continuously evolving geography requires a good understanding in networks. As such, this paper accounts for theories and applications of complex networks and their role both in geography in general, as well as in determining various…

Social and Information Networks · Computer Science 2019-06-24 Alexandra Barina , Gabriel Barina , Mihai Udrescu

We analyze the Optimal Channel Network model for river networks using both analytical and numerical approaches. This is a lattice model in which a functional describing the dissipated energy is introduced and minimized in order to find the…

Statistical Mechanics · Physics 2009-10-28 F. Colaiori , A. Flammini , A. Maritan , J. R. Banavar

Rivers exhibit fractal-like properties that are associated with scaling laws linking geometry and size. The optimal channel network (OCN) model, which is a mathematically tractable representation of river networks often used in theoretical…

Physics and Society · Physics 2025-03-24 E. H. Colombo , A. B. García-Andrade , Ismail , J. M. Calabrese

A large variety of real systems are composed by entities in relationships which can be represented by networks. In many of these systems, elements are embedded in the space and location information impacts properties and evolution. Local…

Physics and Society · Physics 2021-11-09 Michele Tirico , Stefan Balev , Antoine Dutot , Damien Olivier

Subject of research is complex networks and network systems. The network system is defined as a complex network in which flows are moved. Classification of flows in the network is carried out on the basis of ordering and continuity. It is…

Physics and Society · Physics 2017-02-13 Olexandr Polishchuk

Complex networks from such different fields as biology, technology or sociology share similar organization principles. The possibility of a unique growth mechanism promises to uncover universal origins of collective behaviour. In…

Disordered Systems and Neural Networks · Physics 2009-09-29 Chaoming Song , Shlomo Havlin , Hernán A. Makse

Constraints placed upon the phenotypes of organisms result from their interactions with the environment. Over evolutionary timescales, these constraints feed back onto smaller molecular subnetworks comprising the organism. The evolution of…

Molecular Networks · Quantitative Biology 2015-06-10 Cameron Smith , Ximo Pechuan , Raymond S. Puzio , Daniel Biro , Aviv Bergman

Conventional studies of network growth models mainly look at the steady state degree distribution of the graph. Often long time behavior is considered, hence the initial condition is ignored. In this contribution, the time evolution of the…

Physics and Society · Physics 2013-05-10 Babak Fotouhi , Michael Rabbat

We represent transport between different regions of a fluid domain by flow networks, constructed from the discrete representation of the Perron-Frobenius or transfer operator associated to the fluid advection dynamics. The procedure is…

Atmospheric and Oceanic Physics · Physics 2015-03-06 Enrico Ser-Giacomi , Vincent Rossi , Cristobal Lopez , Emilio Hernandez-Garcia

Navigability, an ability to find a logarithmically short path between elements using only local information, is one of the most fascinating properties of real-life networks. However, the exact mechanism responsible for the formation of…

Physics and Society · Physics 2016-07-26 Yury A. Malkov , Alexander Ponomarenko

Networks are important representations in computer science to communicate structural aspects of a given system of interacting components. The evolution of a network has several topological properties that can provide us information on the…

Social and Information Networks · Computer Science 2020-04-30 Joao Pita Costa , Tihana Galinac Grbac

Numerous networks, such as transportation, distribution and delivery networks optimize their designs in order to increase efficiency and lower costs, improving the stability of its intended functions, etc. Networks that distribute goods,…

Physics and Society · Physics 2020-03-26 Fabricio L. Forgerini , Orahcio F. de Sousa