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Phylogenetic trees are binary nonplanar trees with labelled leaves, and plane oriented recursive trees are planar trees with an increasing labelling. Both families are enumerated by double factorials. A bijection is constructed, using the…

Combinatorics · Mathematics 2017-09-19 Helmut Prodinger

There are several data structures which can calculate the prefix sums of an array efficiently, while handling point updates on the array, such as Segment Trees and Binary Indexed Trees (BIT). Both these data structures can handle the these…

Data Structures and Algorithms · Computer Science 2016-12-30 Anubhav Baweja

Trees are partial orderings where every element has a linearly ordered set of smaller elements. We define and study several natural notions of completeness of trees, extending Dedekind completeness of linear orders and Dedekind-MacNeille…

Combinatorics · Mathematics 2023-01-18 Valentin Goranko , Ruaan Kellerman , Alberto Zanardo

Tree-width is an invaluable tool for computational problems on graphs. But often one would like to compute on other kinds of objects (e.g. decorated graphs or even algebraic structures) where there is no known tree-width analogue. Here we…

Combinatorics · Mathematics 2022-06-22 Benjamin Merlin Bumpus , Zoltan A. Kocsis

A layerwise search in a split-by-edges tree (as defined by Br{\ae}ndeland, 2015) of agiven graph produces a maximum independent set in exponential time. A depth-first search produces an independent set, which may or may not be a maximum, in…

Data Structures and Algorithms · Computer Science 2015-05-06 Asbjørn Brændeland

We herein introduce a new method of interpretable clustering that uses unsupervised binary trees. It is a three-stage procedure, the first stage of which entails a series of recursive binary splits to reduce the heterogeneity of the data…

Methodology · Statistics 2011-10-28 Ricardo Fraiman , Badih Ghattas , Marcela Svarc

We consider a general metric Steiner problem which is of finding a set $\mathcal{S}$ with minimal length such that $\mathcal{S} \cup A$ is connected, where $A$ is a given compact subset of a given complete metric space $X$; a solution is…

Metric Geometry · Mathematics 2023-02-07 D. Cherkashin , Y. Teplitskaya

Dependency trees have proven to be a very successful model to represent the syntactic structure of sentences of human languages. In these structures, vertices are words and edges connect syntactically-dependent words. The tendency of these…

Computation and Language · Computer Science 2024-03-05 Lluís Alemany-Puig , Ramon Ferrer-i-Cancho

An edge-ordered graph is a graph with a total ordering of its edges. A path $P=v_1v_2\ldots v_k$ in an edge-ordered graph is called increasing if $(v_iv_{i+1}) > (v_{i+1}v_{i+2})$ for all $i = 1,\ldots,k-2$; it is called decreasing if…

Combinatorics · Mathematics 2020-01-22 Frank Duque , Ruy Fabila-Monroy , Carlos Hidalgo-Toscano , Pablo Pérez-Lantero

A staged tree model is a discrete statistical model encoding relationships between events. These models are realised by directed trees with coloured vertices. In algebro-geometric terms, the model consists of points inside a toric variety.…

Commutative Algebra · Mathematics 2022-07-04 Christiane Görgen , Aida Maraj , Lisa Nicklasson

An alphabetic binary tree formulation applies to problems in which an outcome needs to be determined via alphabetically ordered search prior to the termination of some window of opportunity. Rather than finding a decision tree minimizing…

Information Theory · Computer Science 2009-03-28 Michael B. Baer

The arithmetic of the natural numbers can be extended to arithmetic operations on planar binary trees. This gives rise to a non-commutative arithmetic theory. In this exposition, we describe this arithmetree, first defined by Loday, and…

Combinatorics · Mathematics 2008-09-26 Adriano Bruno , Dan Yasaki

This paper is devoted to a systematic study of a class of binary trees encoding the structure of rational numbers both from arithmetic and dynamical point of view. The paper is divided into two parts. The first one is a critical review of…

Dynamical Systems · Mathematics 2008-05-16 Claudio Bonanno , Stefano Isola

Phylogenetic networks are a generalisation of phylogenetic trees that allow for more complex evolutionary histories that include hybridisation-like processes. It is of considerable interest whether a network can be considered `tree-like' or…

Populations and Evolution · Quantitative Biology 2017-11-21 Michael Hendriksen

We calculate the density and expectation for the number of lineages in a reconstructed tree with $n$ extant species. This is done with conditioning on the age of the tree as well as with assuming a uniform prior for the age of the tree.

Probability · Mathematics 2007-11-05 Tanja Gernhard , Dennis Wong

The Horton-Strahler (HS) index $r=\max{(i,j)}+\delta_{i,j}$ has been shown to be relevant to a number of physical (such at diffusion limited aggregation) geological (river networks), biological (pulmonary arteries, blood vessels, various…

Statistical Mechanics · Physics 2009-11-07 Z. Toroczkai

We provide a unified framework for the treatment of special integrable systems which we propose to call "generalized mean field systems". Thereby previous results on integrable classical and quantum systems are generalized. Following…

Mathematical Physics · Physics 2015-03-13 Bjoern Erbe , Heinz-Juergen Schmidt

The Calkin-Wilf tree is an infinite binary tree whose vertices are the positive rational numbers. Each number occurs in the tree exactly once and in the form $a/b$, where are $a$ and $b$ are relatively prime positive integers. For every…

Number Theory · Mathematics 2020-04-22 Melvyn B. Nathanson

Following an argument advanced by Feynman, we consider a method for obtaining the effective action which generates the sum of tree diagrams with external physical particles. This technique is applied, in the unbroken \lambda \phi^4 theory,…

High Energy Physics - Theory · Physics 2009-10-28 Fernando T Brandt , Josif Frenkel

We take a global view at substitution invariant Sturmian sequences. We show that homogeneous substitution invariant Sturmian sequences $s_{\alpha,\alpha}$ can be indexed by two binary trees, associated directly to Johannes Kepler's tree of…

Combinatorics · Mathematics 2017-05-25 Michel Dekking