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The dimension of a partial order $P$ is the minimum number of linear orders whose intersection is $P$. There are efficient algorithms to test if a partial order has dimension at most $2$. In 1982 Yannakakis showed that for $k\geq 3$ to test…
Any model of ZFC + GCH has a generic extension (made with a poset of size aleph_2) in which the following hold: MA + 2^{aleph_0}= aleph_2+ there exists a Delta^2_1-well ordering of the reals. The proof consists in iterating posets designed…
To obtain comprehensive performance, heavy elements were added into superalloys for solid solution hardening. In this article, it is found by scanning transmission electron microscope observation that rather than distribute randomly…
The ``comma sequence'' starts with 1 and is defined by the property that if k and k' are consecutive terms, the two-digit number formed from the last digit of k and the first digit of k' is equal to the difference k'-k. If there is more…
For every natural number $n\geq 2$ and every finite sequence $L$ of natural numbers, we consider the set $UD_n(L)$ of all uniquely decodable codes over an $n$-letter alphabet with the sequence $L$ as the sequence of code word lengths, as…
The Boolean lattice $2^{[n]}$ is the power set of $[n]$ ordered by inclusion. A chain $c_{0}\subset...\subset c_{k}$ in $2^{[n]}$ is rank-symmetric, if $|c_{i}|+|c_{k-i}|=n$ for $i=0,...,k$; and it is symmetric, if $|c_{i}|=(n-k)/2+i$. We…
Sequence organizations are viewed from two points: one is from informational redundancy or informational correlation (IC) and another is from k-mer frequency statistics. Two problems are investigated. The first is how the ICs exceed the…
Let $A$ and $B$ be two number sequences of length $n$ and $m$, respectively, where $m\le n$. Given a positive number $\delta$, a common almost increasing sequence $s_1\ldots s_k$ is a common subsequence for both $A$ and $B$ such that for…
Common meadows are commutative and associative algebraic structures with two operations (addition and multiplication) with additive and multiplicative identities and for which inverses are total. The inverse of zero is an error term…
We examine the open problem of finding the shortest string that contains each of the n! permutations of n symbols as contiguous substrings (i.e., the shortest superpermutation on n symbols). It has been conjectured that the shortest…
A sequence x=x_1 x_2...x_n $ is said to be an ascent sequence of length $n$ if it satisfies x_1=0 and $0\leq x_i\leq asc(x_1x_2...x_{i-1})+1$ for all $2\leq i\leq n$, where $asc(x_1x_2... x_{i-1})$ is the number of ascents in the sequence…
Given two strings $S$ and $P$, the Episode Matching problem is to find the shortest substring of $S$ that contains $P$ as a subsequence. The best known upper bound for this problem is $\tilde O(nm)$ by Das et al. (1997) , where $n,m$ are…
Algorithms to find optimal alignments among strings, or to find a parsimonious summary of a collection of strings, are well studied in a variety of contexts, addressing a wide range of interesting applications. In this paper, we consider…
We estimate the maximum-order complexity of a binary sequence in terms of its correlation measures. Roughly speaking, we show that any sequence with small correlation measure up to a sufficiently large order $k$ cannot have very small…
For every integer $\ell \geq 7$, we give a structural description of the class of graphs whose chordless cycles of length at least 4 all have length $\ell$.
Longest Increasing Subsequence (LIS) is a fundamental statistic of a sequence, and has been studied for decades. While the LIS of a sequence of length $n$ can be computed exactly in time $O(n\log n)$, the complexity of estimating the…
The discrepancy of a binary string refers to the maximum (absolute) difference between the number of ones and the number of zeroes over all possible substrings of the given binary string. We provide an investigation of the discrepancy of…
We answer the following question of R. L. Graham: What is the discrepancy of the lexicographically-least binary de Bruijn sequence? Here, "discrepancy" refers to the maximum (absolute) difference between the number of ones and the number of…
Motivated by many applications, we study clustering with a faulty oracle. In this problem, there are $n$ items belonging to $k$ unknown clusters, and the algorithm is allowed to ask the oracle whether two items belong to the same cluster or…
In the Kingman coalescent tree the length of order $r$ is defined as the sum of the lengths of all branches that support $r$ leaves. For $r=1$ these branches are external, while for $r\ge2$ they are internal and carry a subtree with $r$…