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Predicting the kinetics of drug-protein interactions is crucial for understanding drug efficacy, particularly in personalized medicine, where protein mutations can significantly alter drug residence times. This study applies Replica…

Biological Physics · Physics 2025-05-27 Wouter Vervust , Daniel T. Zhang , Enrico Riccardi , Titus S. van Erp , An Ghysels

Spike-Timing Dependent Plasticity (STDP) is believed to play an important role in learning and the formation of computational function in the brain. The classical model of STDP which considers the timing between pairs of pre-synaptic and…

Neural and Evolutionary Computing · Computer Science 2013-03-21 Mostafa Rahimi Azghadi , Said Al-Sarawi , Nicolangelo Iannella , Derek Abbott

Predicting future physical behavior from limited theoretical simulation data is an emerging research paradigm driven by the integration of artificial intelligence and quantum physics. In this work, charge transport (CT) behavior was…

Chemical Physics · Physics 2025-07-15 Zi-Ran Zhao , Shun-Cai Zhao , Yi-Meng Huang

A proposition that connects randomness and compression is put forward via Gibbs entropy over set of measurement vectors associated with a compression process. The proposition states that a lossy compression process is equivalent to {\it…

Machine Learning · Statistics 2026-01-06 M. Süzen

Bistability of MAP kinase (MAPK) activity has been suggested to contribute to several cellular processes, including differentiation and long-term synaptic potentiation. A recent model (48) predicts bistability due to interactions of the…

Molecular Networks · Quantitative Biology 2008-02-19 Paul Smolen , Douglas A. Baxter , John H. Byrne

Large language models (LLMs) have achieved remarkable success in complex reasoning tasks via long chain-of-thought (CoT), yet their immense computational overhead hinders real-world deployment. LLM reasoning distillation addresses this by…

Computation and Language · Computer Science 2026-05-20 Bing Wang , Shaotian Yan , Chen Shen , kaiyuan liu , Sinan Fan , Ximing Li , Rui Miao , Xiaosong Yuan , Zhanming Shen , Jieping Ye

Recent evidence in rodent cerebral cortex and olfactory bulb suggests that short-term dynamics of excitatory synaptic transmission is correlated to stereotypical connectivity motifs. It was observed that neurons with short-term facilitating…

Neurons and Cognition · Quantitative Biology 2016-04-08 Eleni Vasilaki , Michele Giugliano

Long context reasoning in large language models (LLMs) has demonstrated enhancement of their cognitive capabilities via chain-of-thought (CoT) inference. Training such models is usually done via reinforcement learning with verifiable…

Computation and Language · Computer Science 2025-12-05 Purbesh Mitra , Sennur Ulukus

Handling long-range dependencies in neural architectures has remained a persistent challenge due to computational limitations and inefficient contextual retention mechanisms. Tensorial operations have provided a foundation for restructuring…

Computation and Language · Computer Science 2025-08-11 Larin Tonix , Morgana Baskerville , Nathaniel Stourton , Ophelia Tattershall

Attempts to render deep learning models interpretable, data-efficient, and robust have seen some success through hybridisation with rule-based systems, for example, in Neural Theorem Provers (NTPs). These neuro-symbolic models can induce…

Artificial Intelligence · Computer Science 2020-08-25 Pasquale Minervini , Sebastian Riedel , Pontus Stenetorp , Edward Grefenstette , Tim Rocktäschel

Cognitive Behavioral Therapy (CBT) is a well-established, evidence-based treatment for Major Depressive Disorder. Unfortunately, there exist significant barriers to individuals accessing CBT, including cost, scarcity of therapists and…

Artificial Intelligence · Computer Science 2025-09-23 Talha Tahir

While LLM-based TTS models exhibit zero-shot emotion and speaker cloning, their cloning fidelity and pronunciation clarity degrade on unseen domains. Fine-tuning is essential for adaptation, yet uniform approaches overlook specific…

Audio and Speech Processing · Electrical Eng. & Systems 2026-03-09 Tianrui Wang , Meng Ge , Cheng Gong , Chunyu Qiang , Haoyu Wang , Zikang Huang , Yu Jiang , Ye Ni , Yuheng Lu , Xiaobao Wang , Engsiong Chng , Xie Chen , Longbiao Wang , Jianwu Dang

In this paper, we derive a new model of synaptic plasticity, based on recent algorithms for reinforcement learning (in which an agent attempts to learn appropriate actions to maximize its long-term average reward). We show that these direct…

Machine Learning · Computer Science 2019-11-19 Peter L. Bartlett , Jonathan Baxter

Synapses change on multiple timescales, ranging from milliseconds to minutes, due to a combination of both short- and long-term plasticity. Here we develop an extension of the common Generalized Linear Model to infer both short- and…

Neurons and Cognition · Quantitative Biology 2022-08-15 Ganchao Wei , Ian H. Stevenson

Spiking Neural Networks (SNNs), recognized for their biological plausibility and energy efficiency, employ sparse and asynchronous spikes for communication. However, the training of SNNs encounters difficulties coming from…

Neurons and Cognition · Quantitative Biology 2024-05-09 Sushant Yadav , Santosh Chaudhary , Rajesh Kumar

Continual post-training (CPT) is a popular and effective technique for adapting foundation models like multimodal large language models to specific and ever-evolving downstream tasks. While existing research has primarily concentrated on…

Machine Learning · Computer Science 2026-01-22 Song Lai , Haohan Zhao , Rong Feng , Changyi Ma , Wenzhuo Liu , Hongbo Zhao , Xi Lin , Dong Yi , Qingfu Zhang , Hongbin Liu , Gaofeng Meng , Fei Zhu

Reinforcement Learning (RL) has emerged as an efficient method of choice for solving complex sequential decision making problems in automatic control, computer science, economics, and biology. In this paper we present a model-free RL…

Logic in Computer Science · Computer Science 2019-09-13 Mohammadhosein Hasanbeig , Yiannis Kantaros , Alessandro Abate , Daniel Kroening , George J. Pappas , Insup Lee

LLMs have demonstrated remarkable proficiency in understanding tasks but continue to struggle with long-context comprehension, particularly with content located in the middle of extensive inputs. This limitation, known as the…

Computation and Language · Computer Science 2025-03-03 James Begin , Namit Agrawal , Eshan Singh , Yicheng Fu , Sean O'Brien , Vasu Sharma , Kevin Zhu

Despite the promising performance of state space models (SSMs) in long sequence modeling, limitations still exist. Advanced SSMs like S5 and S6 (Mamba) in addressing non-uniform sampling, their recursive structures impede efficient SSM…

Machine Learning · Computer Science 2024-06-11 Biqing Qi , Junqi Gao , Kaiyan Zhang , Dong Li , Jianxing Liu , Ligang Wu , Bowen Zhou

Thanks to recent explosive developments of data-driven learning methodologies, reinforcement learning (RL) emerges as a promising solution to address the legged locomotion problem in robotics. In this paper, we propose CTS, a novel…

Robotics · Computer Science 2024-09-04 Hongxi Wang , Haoxiang Luo , Wei Zhang , Hua Chen