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Related papers: Coherent band pathways between knots and links

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In this paper, we study a geometric/topological measure of knots and links called the nullification number. The nullification of knots/links is believed to be biologically relevant. For example, in DNA topology, one can intuitively regard…

Geometric Topology · Mathematics 2015-03-17 Yuanan Diao , Claus Ernst , Anthony Montemayor

This paper investigates the relationship between the signature and the crossing number of knots and links. We refine existing theorems and provide a comprehensive classification of links with specific properties, particularly those with…

Geometric Topology · Mathematics 2024-10-02 Kai Ishihara , Kei Okada , Koya Shimokawa

Site-specific recombination is an enzymatic process where two sites of precise sequence and orientation along a circle come together, are cleaved, and the ends are recombined. Site-specific recombination on a knotted substrate produces…

Geometric Topology · Mathematics 2018-10-23 Allison H. Moore , Mariel Vazquez

This paper gives new and elementary combinatorial topological proofs of the classification of unoriented and oriented rational knots and links. These proofs are based on the known classification of alternating knots through flyping, and the…

Geometric Topology · Mathematics 2007-05-23 Louis H. Kauffman , Sofia Lambropoulou

Minimum braids are a complete invariant of knots and links. This paper defines minimum braids, describes how they can be generated, presents tables for knots up to ten crossings and oriented links up to nine crossings, and uses minimum…

Geometric Topology · Mathematics 2007-05-23 Thomas A. Gittings

We consider a relation between two kinds of unknotting numbers defined by using a band surgery on unoriented knots; the band-unknotting number and H(2)-unknotting number, which we may characterize in terms of the first Betti number of…

Geometric Topology · Mathematics 2011-12-13 Tetsuya Abe , Taizo Kanenobu

Recent studies classify the topology of proteins by analysing the distribution of their projections using knotoids. The approximation of this distribution depends on the number of projection directions that are sampled. Here we investigate…

Geometric Topology · Mathematics 2021-02-19 Agnese Barbensi , Dimos Goundaroulis

We computationally explore non-coherent band attachments between low crossing number knots, using grid diagrams. We significantly improve the current H(2)-distance table. In particular, we find two new distance one pairs with fewer than…

In links with two components there are three different types of crossings: self-crossings in the first component, self crossings in the second component, and crossings between components. In this paper we examine the minimum number of…

Geometric Topology · Mathematics 2020-05-26 Natalie DuBois , Chris Eufemia , Jeff Johannes , Jenna Zomback

We publish a table of primitive finite-type invariants of order less than or equal to six, for knots of ten or fewer crossings. We note certain mod-2 congruences, one of which leads to a chirality criterion in the Alexander polynomial. We…

Geometric Topology · Mathematics 2007-05-23 Ted Stanford

In a quantum communication network, links represent entanglement between qubits located at different nodes. Even if two nodes are not directly linked by shared entanglement, communication channels can be established between them via quantum…

Quantum Physics · Physics 2025-03-07 Xiangyi Meng , Bingjie Hao , Balázs Ráth , István A. Kovács

Tying knots and linking microscopic loops of polymers, macromolecules, or defect lines in complex materials is a challenging task for material scientists. We demonstrate the knotting of microscopic topological defect lines in chiral nematic…

Soft Condensed Matter · Physics 2011-07-11 Uroš Tkalec , Miha Ravnik , Simon Čopar , Slobodan Žumer , Igor Muševič

We develop a model characterizing all possible knots and links arising from recombination starting with a twist knot substrate, extending previous work of Buck and Flapan. We show that all knot or link products fall into three…

Geometric Topology · Mathematics 2015-05-19 Dorothy Buck , Karin Valencia

We determine the locally flat cobordism distance between torus knots with small and large braid index, up to high precision. Here small means 2, 3, 4, or 6. As an application, we derive a surprising fact about torus knots that appear as…

Geometric Topology · Mathematics 2026-02-11 Sebastian Baader , Lukas Lewark , Filip Misev , Paula Truöl

We use the knot homology of Khovanov and Lee to construct link concordance invariants generalizing the Rasmussen $s$-invariant of knots. The relevant invariant for a link is a filtration on a vector space of dimension $2^{|L|}$. The basic…

Geometric Topology · Mathematics 2012-08-14 John Pardon

The protein recombinase can change the knot type of circular DNA. The action of a recombinase converting one knot into another knot is normally mathematically modeled by band surgery. Band surgeries on a 2-bridge knot N((4mn-1)/(2m))…

Geometric Topology · Mathematics 2016-01-20 Isabel K. Darcy , Kai Ishihara , Ram K. Medikonduri , Koya Shimokawa

We study the booklink, a braid-like embedding with local maxima and minima, and the bridge-braid spectrum of a link, which captures the smallest number of braid-strands in a booklink with a prescribed number of critical points. This…

Geometric Topology · Mathematics 2024-11-18 Margaret Doig , Chase Gehringer

Knots are fascinating topological structures that have been observed in various contexts, ranging from micro-worlds to macro-systems, and are conjectured to play a fundamental role in their respective fields. In order to characterize their…

Biological Physics · Physics 2021-10-27 Tian Chen , Xingen Zheng , Qingsong Pei , Deyuan Zou , Houjun Sun , Xiangdong Zhang

We prove that the detection rate of n-crossing alternating links by many standard link invariants decays exponentially in n, implying that they detect alternating links with probability zero. This phenomenon applies broadly, in particular…

Geometric Topology · Mathematics 2025-12-02 Tuomas Kelomäki , Abel Lacabanne , Daniel Tubbenhauer , Pedro Vaz , Victor L. Zhang

In this paper, we give a method to evaluate minimum numbers of Dehn colors for knots by using symmetric local biquandle cocycle invariants. We give answers to some questions arising as a consequence of our previous paper [6]. In particular,…

Geometric Topology · Mathematics 2025-04-08 Eri Matsudo , Kanako Oshiro , Gaishi Yamagishi
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