English

Recent advances on the non-coherent band surgery model for site-specific recombination

Geometric Topology 2018-10-23 v1 Biomolecules Quantitative Methods

Abstract

Site-specific recombination is an enzymatic process where two sites of precise sequence and orientation along a circle come together, are cleaved, and the ends are recombined. Site-specific recombination on a knotted substrate produces another knot or a two-component link depending on the relative orientation of the sites prior to recombination. Mathematically, site-specific recombination is modeled as coherent (knot to link) or non-coherent (knot to knot) banding. We here survey recent developments in the study of non-coherent bandings on knots and discuss biological implications.

Keywords

Cite

@article{arxiv.1810.08751,
  title  = {Recent advances on the non-coherent band surgery model for site-specific recombination},
  author = {Allison H. Moore and Mariel Vazquez},
  journal= {arXiv preprint arXiv:1810.08751},
  year   = {2018}
}

Comments

This is an invited expository article