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In this paper, we introduce a variation of the group testing problem capturing the idea that a positive test requires a combination of multiple ``types'' of item. Specifically, we assume that there are multiple disjoint \emph{semi-defective…

Information Theory · Computer Science 2024-05-10 Thach V. Bui , Jonathan Scarlett

Genetic association analyses often involve data from multiple potentially-heterogeneous subgroups. The expected amount of heterogeneity can vary from modest (e.g., a typical meta-analysis) to large (e.g., a strong gene--environment…

Methodology · Statistics 2014-04-15 Xiaoquan Wen , Matthew Stephens

Genetic variants identified to date by genome-wide association studies only explain a small fraction of total heritability. Gene-by-gene interaction is one important potential source of unexplained heritability. In the first part of this…

Methodology · Statistics 2016-05-10 Chen Lu

Image-language models with prompt learning have shown remarkable advances in numerous downstream vision tasks. Nevertheless, conventional prompt learning methods overfit their training distribution and lose the generalization ability on…

Computer Vision and Pattern Recognition · Computer Science 2024-02-16 Zehao Xiao , Jiayi Shen , Mohammad Mahdi Derakhshani , Shengcai Liao , Cees G. M. Snoek

In this paper, for the problem of heteroskedastic general linear hypothesis testing (GLHT) in high-dimensional settings, we propose a random integration method based on the reference L2-norm to deal with such problems. The asymptotic…

Statistics Theory · Mathematics 2024-09-19 Mingxiang Cao , Hongwei Zhang , Kai Xu , Daojiang He

The presence of MGMT promoter methylation significantly affects how well chemotherapy works for patients with Glioblastoma Multiforme (GBM). Currently, confirmation of MGMT promoter methylation relies on invasive brain tumor tissue…

Computer Vision and Pattern Recognition · Computer Science 2025-12-17 Rawan Alyahya , Asrar Alruwayqi , Atheer Alqarni , Asma Alkhaldi , Metab Alkubeyyer , Xin Gao , Mona Alshahrani

Latent variable collaborative filtering methods have been a standard approach to modelling user-click interactions due to their simplicity and effectiveness. However, there is limited work on analyzing the mathematical properties of these…

Information Retrieval · Computer Science 2024-10-29 Hisham Husain , Julien Monteil

The discovery of Metal-Organic Frameworks (MOFs) with application-specific properties remains a central challenge in materials chemistry, owing to the immense size and complexity of their structural design space. Conventional computational…

Machine Learning · Computer Science 2025-06-03 Srivathsan Badrinarayanan , Rishikesh Magar , Akshay Antony , Radheesh Sharma Meda , Amir Barati Farimani

We provide a distribution-free test that can be used to determine whether any two joint distributions $p$ and $q$ are statistically different by inspection of a large enough set of samples. Following recent efforts from Long et al. [1], we…

Machine Learning · Computer Science 2016-07-26 Francesco Solera , Andrea Palazzi

Federated learning facilitates the collaborative learning of a global model across multiple distributed medical institutions without centralizing data. Nevertheless, the expensive cost of annotation on local clients remains an obstacle to…

Computer Vision and Pattern Recognition · Computer Science 2024-04-23 Jiayi Chen , Benteng Ma , Hengfei Cui , Yong Xia

In the field of multiple hypothesis testing, combining p-values represents a fundamental statistical method. The Cauchy combination test (CCT) (Liu and Xie, 2020) excels among numerous methods for combining p-values with powerful and…

Methodology · Statistics 2024-10-17 Yanyan Ouyang , Xingwei Liu , Lixing Zhu , Wangli Xu

A prespecified set of genes may be enriched, to varying degrees, for genes that have altered expression levels relative to two or more states of a cell. Knowing the enrichment of gene sets defined by functional categories, such as gene…

The past few years have seen impressive progress in the development of deep generative models capable of producing high-dimensional, complex, and photo-realistic data. However, current methods for evaluating such models remain incomplete:…

Machine Learning · Computer Science 2024-03-14 Marco Jiralerspong , Avishek Joey Bose , Ian Gemp , Chongli Qin , Yoram Bachrach , Gauthier Gidel

Sample size calculations for power analysis are critical for clinical research and trial design, yet their complexity and reliance on statistical expertise create barriers for many researchers. We introduce PowerGPT, an AI-powered system…

Federated edge learning (FEEL) provides a promising foundation for edge artificial intelligence (AI) by enabling collaborative model training while preserving data privacy. However, limited and heterogeneous local datasets, as well as…

Machine Learning · Computer Science 2025-12-01 Xinnong Du , Zhonghao Lyu , Xiaowen Cao , Chunyang Wen , Shuguang Cui , Jie Xu

The objective of goodness-of-fit testing is to assess whether a dataset of observations is likely to have been drawn from a candidate probability distribution. This paper presents a rank-based family of goodness-of-fit tests that is…

Statistics Theory · Mathematics 2019-04-18 Feras A. Saad , Cameron E. Freer , Nathanael L. Ackerman , Vikash K. Mansinghka

DNA methylation (DNAme) is a critical component of the epigenetic regulatory machinery and aberrations in DNAme patterns occur in many diseases, such as cancer. Mapping and understanding DNAme profiles offers considerable promise for…

Group testing (GT) is the art of identifying binary signals and the marketplace for exchanging new ideas for related fields such as unique-element counting, compressed sensing, traitor tracing, and geno-typing. A GT scheme can be…

Information Theory · Computer Science 2024-05-28 Hsin-Po Wang , Venkatesan Guruswami

Admixture mapping is a popular tool to identify regions of the genome associated with traits in a recently admixed population. Existing methods have been developed primarily for identification of a single locus influencing a dichotomous…

Applications · Statistics 2011-11-24 Bin Zhu , Allison E. Ashley-Koch , David B. Dunson

Accurately predicting chronological age from DNA methylation patterns is crucial for advancing biological age estimation. However, this task is made challenging by Epigenetic Correlation Drift (ECD) and Heterogeneity Among CpGs (HAC), which…

Genomics · Quantitative Biology 2025-01-07 Zipeng Wu , Daniel Herring , Fabian Spill , James Andrews