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Addressing the complexity of accurately classifying International Classification of Diseases (ICD) codes from medical discharge summaries is challenging due to the intricate nature of medical documentation. This paper explores the use of…

Machine Learning · Computer Science 2024-11-12 Zeyd Boukhers , AmeerAli Khan , Qusai Ramadan , Cong Yang

Leveraging generative Artificial Intelligence (AI), we have transformed a dataset comprising 1,000 scientific papers into an ontological knowledge graph. Through an in-depth structural analysis, we have calculated node degrees, identified…

Machine Learning · Computer Science 2024-06-12 Markus J. Buehler

Predicting cancer treatment outcomes requires models that are both accurate and interpretable, particularly in the presence of heterogeneous clinical data. While large language models (LLMs) have shown strong performance in biomedical NLP,…

Computation and Language · Computer Science 2025-10-21 Raghu Vamshi Hemadri , Geetha Krishna Guruju , Kristi Topollai , Anna Ewa Choromanska

This article deals with the semantic Web and ontologies. It addresses the issue of the classification of multilingual Web documents, based on domain ontology. The objective is being able, using a model, to classify documents in different…

Information Retrieval · Computer Science 2012-06-22 Zakaria Elberrichi , Malika Taibi , Amel Belaggoun

Science and engineering problems fall in the category of complex conceptual problems that require specific conceptual information (CI) like math/logic -related know-how, process information, or engineering guidelines to solve them. Large…

Computation and Language · Computer Science 2024-12-23 Nishtha N. Vaidya , Thomas Runkler , Thomas Hubauer , Veronika Haderlein-Hoegberg , Maja Mlicic Brandt

Explainable Artificial Intelligence (AI) focuses on helping humans understand the working of AI systems or their decisions and has been a cornerstone of AI for decades. Recent research in explainability has focused on explaining the…

Artificial Intelligence · Computer Science 2024-10-24 Shruthi Chari

In the following contribution, a method is introduced that integrates domain expert-centric ontology design with the Cross-Industry Standard Process for Data Mining (CRISP-DM). This approach aims to efficiently build an application-specific…

Artificial Intelligence · Computer Science 2024-07-10 Milapji Singh Gill , Tom Westermann , Gernot Steindl , Felix Gehlhoff , Alexander Fay

Faceted classifications define dimensions for the types of entities included. In effect, the facets provide an "ontological commitment". We compare a faceted thesaurus, the Art and Architecture Thesaurus (AAT), with ontologies derived from…

Digital Libraries · Computer Science 2018-09-26 Robert B. Allen , Jaihyun Park

Chronious is an Open, Ubiquitous and Adaptive Chronic Disease Management Platform for Chronic Obstructive Pulmonary Disease(COPD) Chronic Kidney Disease (CKD) and Renal Insufficiency. It consists of several modules: an ontology based…

Information Retrieval · Computer Science 2012-03-21 Piero Giacomelli , Giulia Munaro , Roberto Rosso

In collaborative agile ontology development projects support for modular reuse of ontologies from large existing remote repositories, ontology project life cycle management, and transitive dependency management are important needs. The…

Software Engineering · Computer Science 2013-09-30 Adrian Paschke

Capability ontologies are increasingly used to model functionalities of systems or machines. The creation of such ontological models with all properties and constraints of capabilities is very complex and can only be done by ontology…

Artificial Intelligence · Computer Science 2024-10-21 Luis Miguel Vieira da Silva , Aljosha Köcher , Felix Gehlhoff , Alexander Fay

Creation and curation of knowledge graphs can accelerate disease discovery and analysis in real-world data. While disease ontologies aid in biological data annotation, codified categories (SNOMED-CT, ICD10, CPT) may not capture patient…

Computation and Language · Computer Science 2024-12-23 Edward Kim , Manil Shrestha , Richard Foty , Tom DeLay , Vicki Seyfert-Margolis

Buildings generate heterogeneous data across their lifecycle, yet integrating these data remains a critical unsolved challenge. Despite three decades of standardization efforts, over 40 metadata schemas now span the building lifecycle, with…

Databases · Computer Science 2026-01-26 Zoltan Nagy , Ryan Wisnesky , Kevin Carlson , Eswaran Subrahmanian , Gioele Zardini

Large Language Models (LLMs) have fundamentally transformed approaches to Natural Language Processing (NLP) tasks across diverse domains. In healthcare, accurate and cost-efficient text classification is crucial, whether for clinical notes…

Computation and Language · Computer Science 2026-02-16 Hajar Sakai , Sarah S. Lam

Artificial intelligence (AI) has become indispensable for managing and processing the vast amounts of data generated during the COVID-19 pandemic. Ontology, which formalizes knowledge within a domain using standardized vocabularies and…

Human-Computer Interaction · Computer Science 2024-11-06 Biswanath Dutta , Debanjali Bain

All aspects of our society, including the life sciences, need a mechanism for people working within them to represent the concepts they employ to carry out their research. For the information systems being designed and developed to support…

Human-Computer Interaction · Computer Science 2025-06-24 R. Lukyanenko , O. Pastor , V. C. Storey

Large language models (LLMs) have demonstrated notable potential in medical applications, yet they face substantial challenges in handling complex real-world clinical diagnoses using conventional prompting methods. Current prompt…

Artificial Intelligence · Computer Science 2026-03-02 Wenliang Li , Rui Yan , Xu Zhang , Li Chen , Hongji Zhu , Jing Zhao , Junjun Li , Mengru Li , Wei Cao , Zihang Jiang , Wei Wei , Kun Zhang , Shaohua Kevin Zhou

Competency Questions (CQs) are used in many ontology engineering methodologies to collect requirements and track the completeness and correctness of an ontology being constructed. Although they are frequently suggested by ontology…

Artificial Intelligence · Computer Science 2021-05-21 Dawid Wiśniewski , Jędrzej Potoniec , Agnieszka Ławrynowicz

Understanding large molecular networks consisting of entities such as genes, proteins or RNAs that interact in complex ways to drive the cellular machinery has been an active focus of systems biology. Computational approaches have played a…

Molecular Networks · Quantitative Biology 2013-04-23 Sriganesh Srihari , Mark A. Ragan

ICD coding is the process of mapping unstructured text from Electronic Health Records (EHRs) to standardised codes defined by the International Classification of Diseases (ICD) system. In order to promote trust and transparency, existing…

Artificial Intelligence · Computer Science 2026-03-13 Mingyang Li , Viktor Schlegel , Tingting Mu , Wuraola Oyewusi , Kai Kang , Goran Nenadic