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As todays world grows with the technology on the other hand it seems to be small with the World Wide Web. With the use of Internet more and more information can be search from the web. When Users fires a query they want relevancy in…
Every year approximately 234 million major surgeries are performed, leading to plentiful, highly diverse data. This is accompanied by a matching number of novel algorithms for the surgical domain. To garner all benefits of surgical data…
Advanced bioimaging technologies have enabled the large-scale acquisition of multidimensional data, yet effective metadata management and interoperability remain significant challenges. To address these issues, we propose a new…
Mathematical oncology is an interdisciplinary research field where the mathematical sciences meet cancer research. Being situated at the intersection of these two fields makes mathematical oncology highly dynamic, as practicing researchers…
The integration of Large Language Models (LLMs) into the drug discovery and development field marks a significant paradigm shift, offering novel methodologies for understanding disease mechanisms, facilitating drug discovery, and optimizing…
The use of ontologies and taxonomies contributes by providing means to define concepts, minimize the ambiguity, improve the interoperability and manage knowledge of the security domain. Thus, this paper presents a literature survey on…
Ontologies represent the conceptual knowledge of a domain. At the core of an ontology is the taxonomy of concepts and subconcepts that represent specific entities, which can be complex to build. In many cases, information is available in…
This work presents an ontology-integrated large language model (LLM) framework for chemical engineering that unites structured domain knowledge with generative reasoning. The proposed pipeline aligns model training and inference with the…
To address the requirement of enabling a comprehensive perspective of life-sciences data, Semantic Web technologies have been adopted for standardized representations of data and linkages between data. This has resulted in data warehouses…
Background: Identification of the interactions and regulatory relations between biomolecules play pivotal roles in understanding complex biological systems and the mechanisms underlying diverse biological functions. However, the collection…
Objective: The majority of detailed patient information in real-world data (RWD) is only consistently available in free-text clinical documents. Manual curation is expensive and time-consuming. Developing natural language processing (NLP)…
The linking of clinical entities is a crucial part of extracting structured information from clinical texts. It is the process of assigning a code from a medical ontology or classification to a phrase in the text. The International…
Personalized oncology aims to tailor treatment strategies to the unique molecular and clinical profiles of individual patients, moving beyond the traditional paradigm of treating the disease not the patient. Achieving this vision requires…
Ontology development methodologies emphasise knowledge gathering from domain experts and documentary resources, and knowledge representation using an ontology language such as OWL or FOL. However, working ontologists are often surprised by…
Ontologies provide formal representation of knowledge shared within Semantic Web applications. Ontology learning involves the construction of ontologies from a given corpus. In the past years, ontology learning has traversed through shallow…
The importance of improving the FAIRness (findability, accessibility, interoperability, reusability) of research data is undeniable, especially in the face of large, complex datasets currently being produced by omics technologies.…
Although traditional statistical techniques and machine learning methods have contributed significantly to genetics and, in particular, inherited disease diagnosis, they often struggle with complex, high-dimensional data, a challenge now…
This work introduces BioLORD, a new pre-training strategy for producing meaningful representations for clinical sentences and biomedical concepts. State-of-the-art methodologies operate by maximizing the similarity in representation of…
This paper discusses the knowledge integration of clinical information extracted from distributed medical ontology in order to ameliorate a machine learning-based multi-label coding assignment system. The proposed approach is implemented…
Deceptive and coercive design practices are increasingly used by companies to extract profit, harvest data, and limit consumer choice. Dark patterns represent the most common contemporary amalgamation of these problematic practices,…