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Accurate gene regulatory networks can be used to explain the emergence of different phenotypes, disease mechanisms, and other biological functions. Many methods have been proposed to infer networks from gene expression data but have been…

Quantitative Methods · Quantitative Biology 2018-12-11 Phan Nguyen , Rosemary Braun

There are many cases in collider physics and elsewhere where a calibration dataset is used to predict the known physics and / or noise of a target region of phase space. This calibration dataset usually cannot be used out-of-the-box but…

High Energy Physics - Phenomenology · Physics 2022-12-14 Radha Mastandrea , Benjamin Nachman

Transcription networks, and other directed networks can be characterized by some topological observables such as for example subgraph occurrence (network motifs). In order to perform such kind of analysis, it is necessary to be able to…

Quantitative Methods · Quantitative Biology 2007-06-04 D. Fusco , B. Bassetti , P. Jona , M. Cosentino Lagomarsino

In real-world applications, one often encounters ambiguously labeled data, where different annotators assign conflicting class labels. Partial-label learning allows training classifiers in this weakly supervised setting, where…

Machine Learning · Computer Science 2025-10-27 Tobias Fuchs , Florian Kalinke , Klemens Böhm

Linear temporal logic (LTL) is a specification language for finite sequences (called traces) widely used in program verification, motion planning in robotics, process mining, and many other areas. We consider the problem of learning LTL…

Artificial Intelligence · Computer Science 2026-01-22 Ritam Raha , Rajarshi Roy , Nathanaël Fijalkow , Daniel Neider

Artificial neural networks are powerful models, which have been widely applied into many aspects of machine translation, such as language modeling and translation modeling. Though notable improvements have been made in these areas, the…

Computation and Language · Computer Science 2017-09-25 Yiming Cui , Shijin Wang , Jianfeng Li

Temporal Point Processes (TPP) with partial likelihoods involving a latent structure often entail an intractable marginalization, thus making inference hard. We propose a novel approach to Maximum Likelihood Estimation (MLE) involving…

Machine Learning · Computer Science 2019-12-20 Amrith Setlur , Barnabás Póczós

We propose a new approach to address the text classification problems when learning with partial labels is beneficial. Instead of offering each training sample a set of candidate labels, we assign negative-oriented labels to the ambiguous…

Machine Learning · Statistics 2019-06-11 Jiangning Chen , Zhibo Dai , Juntao Duan , Qianli Hu , Ruilin Li , Heinrich Matzinger , Ionel Popescu , Haoyan Zhai

The characterisation of termination using well-founded monotone algebras has been a milestone on the way to automated termination techniques, of which we have seen an extensive development over the past years. Both the semantic…

Logic in Computer Science · Computer Science 2015-07-01 Joerg Endrullis , Roel de Vrijer , Johannes Waldmann

Key to structured prediction is exploiting the problem structure to simplify the learning process. A major challenge arises when data exhibit a local structure (e.g., are made by "parts") that can be leveraged to better approximate the…

Machine Learning · Statistics 2019-06-03 Carlo Ciliberto , Francis Bach , Alessandro Rudi

Approximate inference in dynamic systems is the problem of estimating the state of the system given a sequence of actions and partial observations. High precision estimation is fundamental in many applications like diagnosis, natural…

Artificial Intelligence · Computer Science 2012-06-18 Hannaneh Hajishirzi , Eyal Amir

The Lasso (Least Absolute Shrinkage and Selection Operator) has been a popular technique for simultaneous linear regression estimation and variable selection. In this paper, we propose a new novel approach for robust Lasso that follows the…

Methodology · Statistics 2016-05-13 Esa Ollila

Thompson sampling is an efficient algorithm for sequential decision making, which exploits the posterior uncertainty to address the exploration-exploitation dilemma. There has been significant recent interest in integrating Bayesian neural…

Machine Learning · Statistics 2020-08-07 Zhendong Wang , Mingyuan Zhou

In recent years, there is a growing interest in combining techniques attributed to the areas of Statistics and Machine Learning in order to obtain the benefits of both approaches. In this article, the statistical technique lasso for…

Machine Learning · Statistics 2023-09-08 David Delgado , Ernesto Curbelo , Danae Carreras

Large language models (LLMs) can produce long, coherent passages of text, suggesting that LLMs, although trained on next-word prediction, must represent the latent structure that characterizes a document. Prior work has found that internal…

Computation and Language · Computer Science 2023-12-25 Liyi Zhang , R. Thomas McCoy , Theodore R. Sumers , Jian-Qiao Zhu , Thomas L. Griffiths

In machine learning one of the strategic tasks is the selection of only significant variables as predictors for the response(s). In this paper an approach is proposed which consists in the application of permutation tests on the candidate…

The goal of this paper is to propose novel strategies for adaptive learning of signals defined over graphs, which are observed over a (randomly time-varying) subset of vertices. We recast two classical adaptive algorithms in the graph…

Machine Learning · Computer Science 2018-08-01 Paolo Di Lorenzo , Paolo Banelli , Elvin Isufi , Sergio Barbarossa , Geert Leus

The vast majority of theoretical results in machine learning and statistics assume that the available training data is a reasonably reliable reflection of the phenomena to be learned or estimated. Similarly, the majority of machine learning…

Machine Learning · Computer Science 2017-06-13 Moses Charikar , Jacob Steinhardt , Gregory Valiant

Several planners have been proposed to compute robot paths that reach desired goal regions while avoiding obstacles. However, these methods fail when all pathways to the goal are blocked. In such cases, the robot must reason about how to…

Robotics · Computer Science 2025-10-17 Yuqing Zhang , Yiannis Kantaros

Implicit particle filters for data assimilation generate high-probability samples by representing each particle location as a separate function of a common reference variable. This representation requires that a certain underdetermined…

Numerical Analysis · Mathematics 2015-05-27 Matthias Morzfeld , Xuemin Tu , Ethan Atkins , Alexandre J. Chorin