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We perform a kinetic Monte Carlo simulation study of a model of thin film deposition of a two-component mixture in which the activation energy for diffusion of an adatom is additive over its nearest neighbors and in which the interactions…

Materials Science · Physics 2021-06-11 Tung B. T. To , Fábio D. A. Aarão Reis

Monte Carlo simulations of a system consisting of a ferromagnetic layer exchange coupled to a diluted antiferromagnetic layer described by a classical spin model show a strong dependence of the exchange bias on the degree of dilution in…

Statistical Mechanics · Physics 2009-10-31 U. Nowak , A. Misra , K. D. Usadel

Phospholipid bilayers are a major component of the cell membrane that is in contact with physiological electrolyte solutions including salt ions. The effect of salt on the phospholipid bilayer mechanics is an active research area due to its…

Soft Condensed Matter · Physics 2023-10-16 Yaoqi Huang , Vineeth Chandran Suja , Layaa Amirthalingam , Gerald G. Fuller

We study conformational properties of diluted dumbbell polymers which consist of two rings that are attached to both ends of a linear spacer segment by using analytical methods of field theory and bead-spring coarse-grained molecular…

Soft Condensed Matter · Physics 2023-03-22 Khristine Haydukivska , Viktoria Blavatska , Jaroslaw Paturej

The presence and the properties of lipid bilayer nanometer-scale domains might be important for understanding the membranes of living cells. We used molecular dynamics (MD) simulations to investigate perturbations of a small patch of…

Soft Condensed Matter · Physics 2011-06-01 Frederick A. Heberle , David G. Ackerman , Gerald W. Feigenson

Under dehydration conditions, amphipathic Late Embryogenesis Abundant (LEA) proteins fold spontaneously from a random conformation into alpha-helical structures and this transition is promoted by the presence of membranes. To gain insight…

Biological Physics · Physics 2012-06-27 Sergey Pogodin , Nigel K. H. Slater , Vladimir A. Baulin

Active fluid droplets surrounded by oil can spontaneously develop circulatory flows. However, the dynamics of the surrounding oil and their influence on the active fluid remain poorly understood. To investigate interactions between the…

Fluid Dynamics · Physics 2021-05-27 Yen-Chen Chen , Brock Jolicoeur , Chih-Che Chueh , Kun-Ta Wu

We employ 100 ns molecular dynamics simulations to study the influence of cholesterol on structural and dynamic properties of dipalmitoylphosphatidylcholine (DPPC) bilayers in the fluid phase. The effects of the cholesterol content on the…

Soft Condensed Matter · Physics 2009-11-10 Emma Falck , Michael Patra , Mikko Karttunen , Marja T. Hyvonen , Ilpo Vattulainen

Supported Lipid Bilayers (SLBs) are model membranes formed at solid substrate surfaces. This architecture renders the membrane experimentally accessible to surface sensitive techniques used to study their properties, including Atomic Force…

Biological Physics · Physics 2019-11-19 James A. Goodchild , Danielle L. Walsh , Simon D. Connell

In vivo and in vitro lipid bilayers are commonly supported by subcellular structures, particles, and artificial substrates. Deformation of the underlying structure can lead to large, localized deformations as the bilayer deforms to avoid…

Soft Condensed Matter · Physics 2014-03-17 Austin Fergusson , Ravi Kappiyoor , Ganesh Balasubramanian , Ishwar K. Puri , Douglas P. Holmes

We present atomistic molecular dynamics results for fully hydrated bilayers composed of ceramide NS-24:0, free fatty acid 24:0 and cholesterol, to address the effect of the different components in the stratum corneum (the outermost layer of…

Soft Condensed Matter · Physics 2015-05-13 Chinmay Das , Massimo G. Noro , Peter D. Olmsted

Membrane bending is an extensively studied problem from both modeling and experimental perspectives because of the wide implications of curvature generation in cell biology. Many of the curvature generating aspects in membranes can be…

Soft Condensed Matter · Physics 2021-07-21 Arijit Mahapatra , David Saintillan , Padmini Rangamani

We investigate the interaction between highly charged lipid bilayers in the presence of monovalent counterions. Neutron and X-ray reflectivity experiments show that the water layer between like-charged bilayers is thinner than for…

We have shown previously that the dynamics of isolated oil slicks on the water's surface after spills is significantly influenced by surface-wave motion practically at the onset of the spreading process. In this work, we draw our attention…

Fluid Dynamics · Physics 2025-05-21 Hanan Hozan , Mike Baines , Alex Lukyanov

The interaction between oil and foam has been the subject of various studies. Indeed, oil can be an efficient defoaming agent, which can be highly valuable in various industrial applications where undesired foaming may occur, as seen in…

Soft Condensed Matter · Physics 2017-10-04 Rémy Mensire , Elise Lorenceau

We develop a theoretical framework for understanding dynamic morphologies and stability of droplet interface bilayers (DIBs), accounting for lipid kinetics in the monolayers and bilayer, and droplet evaporation due to imbalance between…

Soft Condensed Matter · Physics 2018-06-13 Benjamin Guiselin , Jack O. Law , Buddhapriya Chakrabarti , Halim Kusumaatmaja

We have carried out Monte Carlo simulation of the fusion of bilayers of single chain amphiphiles which show phase behavior similar to that of biological lipids. The fusion mechanism we observe is very different from the ``stalk''…

Soft Condensed Matter · Physics 2009-11-07 M. Mueller , K. Katsov , M. Schick

In lieu of abstract, first paragraph reads: Galimzyanov et al. [1] find that line tension between thick liquid-ordered ($L_{o}$) and thinner liquid-disordered ($L_{d}$) registered lipid bilayer phases is minimised by an asymmetric "slip…

Soft Condensed Matter · Physics 2016-04-14 John J. Williamson , Peter D. Olmsted

The phase-separation process of a binary mixture with order-parameter-dependent mobility under shear flow is numerically studied. The ordering is characterized by an alternate stretching and bursting of domains which produce oscillations in…

Soft Condensed Matter · Physics 2021-12-14 G. Gonnella , A. Lamura

The free energy of a crystalline domain coexisting with a liquid phase on a spherical vesicle may be approximated by an elastic or stretching energy and a line tension term. The stretching energy generally grows as the area of the domain,…

Soft Condensed Matter · Physics 2007-05-23 Y. Chushak , A. Travesset
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