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With the long-term rapid increase in incidences of colorectal cancer (CRC), there is an urgent clinical need to improve risk stratification. The conventional pathology report is usually limited to only a few histopathological features.…

Image and Video Processing · Electrical Eng. & Systems 2020-07-08 Christian Abbet , Inti Zlobec , Behzad Bozorgtabar , Jean-Philippe Thiran

The research reported in this paper identifies the epigenetic biomarker (methylation beta pattern) of breast cancer. Many cancers are triggered by abnormal gene expression levels caused by aberrant methylation of CpG sites in the DNA. In…

Genomics · Quantitative Biology 2019-10-16 Maxim Vaysburd

Cancer is an epidemic worldwide. At present one in four persons has cancer and this statistic will change to one in a two person in the near future. It is now known that war against cancer is the early, curable detection and treatment.…

Tissues and Organs · Quantitative Biology 2017-10-03 Shiva Bhandari , Sri Choudannavar , Ethan Avery , Peeyush Sahay , Prabhakar Pradhan

In this paper, a new framework for obtaining personalized optimal treatment strategies in colon cancer-induced angiogenesis is presented. The dynamics of colon cancer is given by a It\'o stochastic process, which helps in modeling the…

Quantitative Methods · Quantitative Biology 2021-11-16 Souvik Roy , Zui Pan , Suvra Pal

Active Galactic Nuclei (AGN), such as Seyfert galaxies, quasars, etc., show light variations in all wavelength bands, with various amplitude and in many time scales. The variations usually look erratic, not periodic nor purely random. Many…

Cosmology and Nongalactic Astrophysics · Physics 2015-05-28 Chatief Kunjaya , Putra Mahasena , Kiki Vierdayanti , Stefani Herlie

Recently there is a growing focus on graph data, and multi-view graph clustering has become a popular area of research interest. Most of the existing methods are only applicable to homophilous graphs, yet the extensive real-world graph data…

Machine Learning · Computer Science 2024-01-08 Zichen Wen , Yawen Ling , Yazhou Ren , Tianyi Wu , Jianpeng Chen , Xiaorong Pu , Zhifeng Hao , Lifang He

Cancer grading is an essential task in pathology. The recent developments of artificial neural networks in computational pathology have shown that these methods hold great potential for improving the accuracy and quality of cancer…

Computer Vision and Pattern Recognition · Computer Science 2023-07-27 Jaeung Lee , Keunho Byeon , Jin Tae Kwak

A model to describe the arising of new structures in an initial homogeneous biological system is proposed. The essay is motivated by the intention to work on a non-equilibrium situation grouping together several mechanisms and processes as:…

Biological Physics · Physics 2007-05-23 P. C. T. Dajello , P. R. Hauser

In the field of Life Sciences it it very common to deal with extremely complex systems, from both analytical and computational points of view, due to the unavoidable coupling of different interacting structures. As an example, angiogenesis…

Probability · Mathematics 2017-08-15 Vincenzo Capasso , Franco Flandoli

Inevitably, almost all cancer patients develop resistance to targeted therapy. Intratumor heterogeneity (ITH) is a major cause of drug resistance. Mathematical models that explain experiments quantitatively is useful in understanding the…

Soft Condensed Matter · Physics 2021-08-16 Xin Li , D. Thirumalai

Compact Obscured Nuclei (CONs) are heavily obscured infrared cores that have been found in local (ultra)luminous infrared galaxies (U/LIRGs). They show bright emission from vibrationally excited rotational transitions of HCN, known as…

We discuss the expected X-ray spectral and variability properties of black hole accretion discs at high luminosity, under the hypothesis that radiation pressure dominated discs are subject to violent clumping instabilities and, as a result,…

Astrophysics · Physics 2009-09-17 A. Merloni , J. Malzac , A. C. Fabian , R. R. Ross

We study pattern formation of skin cancers by means of numerical simulation of a binary system consisting of cancer and healthy cells. We extend the conventional Model H for macrophase separations by considering a logistic growth of cancer…

Soft Condensed Matter · Physics 2019-03-27 Takuma Hoshino , Ming-Wei Liu , Kuo-An Wu , Hsuan-Yi Chen , Tatsuaki Tsuruyama , Shigeyuki Komura

Colorectal cancer is a one of the highest causes of cancer-related death, especially in men. Polyps are one of the main causes of colorectal cancer and early diagnosis of polyps by colonoscopy could result in successful treatment. Diagnosis…

Image and Video Processing · Electrical Eng. & Systems 2018-02-02 Mojtaba Akbari , Majid Mohrekesh , Ebrahim Nasr-Esfahani , S. M. Reza Soroushmehr , Nader Karimi , Shadrokh Samavi , Kayvan Najarian

The three species ABC model of driven particles on a ring is generalized to include vacancies and particle-nonconserving processes. The model exhibits phase separation at high densities. For equal average densities of the three species, it…

Statistical Mechanics · Physics 2015-05-20 A. Lederhendler , O. Cohen , D. Mukamel

Soft condensed matter structures often challenge us with complex many-body phenomena governed by collective modes spanning wide spatial and temporal domains. In order to successfully tackle such problems mesoscopic coarse-grained (CG)…

Soft Condensed Matter · Physics 2023-07-12 Vlad P Sokhan , Michael A Seaton , Ilian T Todorov

Microscopic images from the biopsy samples of cervical cancer, the current "gold standard" for histopathology analysis, are found to be segregated into differing classes in their correlation properties. Correlation domains clearly indicate…

Medical Physics · Physics 2012-08-15 Jaidip Jagtap , Nishigandha Patil , Chayanika Kala , Kiran Pandey , Asha Agarwa , Asima Pradhan

Accurate polyp detection is critical for early colorectal cancer diagnosis. Although remarkable progress has been achieved in recent years, the complex colon environment and concealed polyps with unclear boundaries still pose severe…

Computer Vision and Pattern Recognition · Computer Science 2024-01-11 Yuncheng Jiang , Zixun Zhang , Yiwen Hu , Guanbin Li , Xiang Wan , Song Wu , Shuguang Cui , Silin Huang , Zhen Li

Using geometrical arguments it is shown that Cancer Stem Cells (CSC) must be confined inside solid tumors under natural situations. Aided by an agent-based model and percolation theory, the probability for a CSC to be at the border of a…

Biological Physics · Physics 2020-10-20 Lucas Barberis

A tumor can be thought of as an ecosystem, which critically means that we cannot just consider it as a collection of mutated cells but more as a complex system of many interacting cellular and microenvironmental elements. At its simplest, a…

Populations and Evolution · Quantitative Biology 2013-05-03 Jill Gallaher , Alexander R. A. Anderson