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This paper provides theoretical and computational developments in statistical shape analysis of shape graphs, and demonstrates them using analysis of complex data from retinal blood-vessel (RBV) networks. The shape graphs are represented by…

Methodology · Statistics 2022-11-29 Aditi Basu Bal , Xiaoyang Guo , Tom Needham , Anuj Srivastava

We propose a novel framework to learn the spatiotemporal variability in longitudinal 3D shape data sets, which contain observations of objects that evolve and deform over time. This problem is challenging since surfaces come with arbitrary…

Computer Vision and Pattern Recognition · Computer Science 2021-08-23 Hamid Laga , Marcel Padilla , Ian H. Jermyn , Sebastian Kurtek , Mohammed Bennamoun , Anuj Srivastava

Statistical shape analysis is a very useful tool in a wide range of medical and biological applications. However, it typically relies on the ability to produce a relatively small number of features that can capture the relevant variability…

Computer Vision and Pattern Recognition · Computer Science 2020-06-16 Riddhish Bhalodia , Ladislav Kavan , Ross Whitaker

This paper proposes the estimation of a mutual shape from a set of different segmentation results using both active contours and information theory. The mutual shape is here defined as a consensus shape estimated from a set of different…

Image and Video Processing · Electrical Eng. & Systems 2021-02-18 S. Jehan-Besson , R. Clouard , C. Tilmant , A. de Cesare , A. Lalande , J. Lebenberg , P. Clarysse , L. Sarry , F. Frouin , M. Garreau

One of the requirements of the population-based approach to Structural Health Monitoring (SHM) proposed in the earlier papers in this sequence, is that structures be represented by points in an abstract space. Furthermore, these spaces…

We propose a new family of depth measures called the elastic depths that can be used to greatly improve shape anomaly detection in functional data. Shape anomalies are functions that have considerably different geometric forms or features…

Methodology · Statistics 2020-08-21 Trevor Harris , James Derek Tucker , Bo Li , Lyndsay Shand

This paper describes a novel framework for computing geodesic paths in shape spaces of spherical surfaces under an elastic Riemannian metric. The novelty lies in defining this Riemannian metric directly on the quotient (shape) space, rather…

Differential Geometry · Mathematics 2016-11-17 Alice Barbara Tumpach , Hassen Drira , Mohamed Daoudi , Anuj Srivastava

In the shape analysis approach to computer vision problems, one treats shapes as points in an infinite-dimensional Riemannian manifold, thereby facilitating algorithms for statistical calculations such as geodesic distance between shapes…

Differential Geometry · Mathematics 2018-03-30 Sebastian Kurtek , Tom Needham

Statistical shape modeling (SSM) characterizes anatomical variations in a population of shapes generated from medical images. SSM requires consistent shape representation across samples in shape cohort. Establishing this representation…

Computer Vision and Pattern Recognition · Computer Science 2022-03-17 Riddhish Bhalodia , Shireen Elhabian , Jadie Adams , Wenzheng Tao , Ladislav Kavan , Ross Whitaker

This paper introduces the concept of functional current as a mathematical framework to represent and treat functional shapes, i.e. sub-manifold supported signals. It is motivated by the growing occurrence, in medical imaging and…

Computational Geometry · Computer Science 2013-04-24 Nicolas Charon , Alain Trouvé

This paper introduces a new mathematical and numerical framework for surface analysis derived from the general setting of elastic Riemannian metrics on shape spaces. Traditionally, those metrics are defined over the infinite dimensional…

Computer Vision and Pattern Recognition · Computer Science 2023-11-09 Emmanuel Hartman , Emery Pierson , Martin Bauer , Mohamed Daoudi , Nicolas Charon

The analysis of curves has been routinely dealt with using tools from functional data analysis. However its extension to multi-dimensional curves poses a new challenge due to its inherent geometric features that are difficult to capture…

Methodology · Statistics 2019-10-29 Juhyun Park , Nicolas J-B. Brunel

This article provides an overview of various notions of shape spaces, including the space of parametrized and unparametrized curves, the space of immersions, the diffeomorphism group and the space of Riemannian metrics. We discuss the…

Differential Geometry · Mathematics 2014-10-07 Martin Bauer , Martins Bruveris , Peter W. Michor

Statistical shape analysis can be done in a Riemannian framework by endowing the set of shapes with a Riemannian metric. Sobolev metrics of order two and higher on shape spaces of parametrized or unparametrized curves have several desirable…

Differential Geometry · Mathematics 2016-10-18 Martin Bauer , Martins Bruveris , Philipp Harms , Jakob Møller-Andersen

Aggregating multi-subject functional magnetic resonance imaging (fMRI) data is indispensable for generating valid and general inferences from patterns distributed across human brains. The disparities in anatomical structures and functional…

Machine Learning · Computer Science 2019-11-20 Weida Li , Mingxia Liu , Fang Chen , Daoqiang Zhang

Statistical Shape Modeling (SSM) is a quantitative method for analyzing morphological variations in anatomical structures. These analyses often necessitate building models on targeted anatomical regions of interest to focus on specific…

Computer Vision and Pattern Recognition · Computer Science 2024-01-02 Hong Xu , Alan Morris , Shireen Y. Elhabian

We propose a novel shape representation useful for analyzing and processing shape collections, as well for a variety of learning and inference tasks. Unlike most approaches that capture variability in a collection by using a template model…

Graphics · Computer Science 2018-06-13 Ruqi Huang , Panos Achlioptas , Leonidas Guibas , Maks Ovsjanikov

The structural connectome is often represented by fiber bundles generated from various types of tractography. We propose a method of analyzing connectomes by representing them as a Riemannian metric, thereby viewing them as points in an…

Computer Vision and Pattern Recognition · Computer Science 2021-03-11 Kristen M. Campbell , Haocheng Dai , Zhe Su , Martin Bauer , P. Thomas Fletcher , Sarang C. Joshi

In this paper, we propose a novel space-time geometric representation of human landmark configurations and derive tools for comparison and classification. We model the temporal evolution of landmarks as parametrized trajectories on the…

Computer Vision and Pattern Recognition · Computer Science 2018-07-03 Anis Kacem , Mohamed Daoudi , Boulbaba Ben Amor , Stefano Berretti , Juan Carlos Alvarez-Paiva

The alignment of shapes has been a crucial step in statistical shape analysis, for example, in calculating mean shape, detecting locational differences between two shape populations, and classification. Procrustes alignment is the most…

Methodology · Statistics 2025-01-06 Mohsen Taheri , Jörn Schulz