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We propose a method for the unsupervised clustering of hyperspectral images based on spatially regularized spectral clustering with ultrametric path distances. The proposed method efficiently combines data density and geometry to…

Computer Vision and Pattern Recognition · Computer Science 2020-04-13 Shukun Zhang , James M. Murphy

In cancer research, clustering techniques are widely used for exploratory analyses and dimensionality reduction, playing a critical role in the identification of novel cancer subtypes, often with direct implications for patient management.…

Clustering a lexicon of words is a well-studied problem in natural language processing (NLP). Word clusters are used to deal with sparse data in statistical language processing, as well as features for solving various NLP tasks (text…

Computation and Language · Computer Science 2018-08-17 Effi Levi , Saggy Herman , Ari Rappoport

Integrative analysis of datasets generated by multiple cohorts is a widely-used approach for increasing sample size, precision of population estimators, and generalizability of analysis results in epidemiological studies. However, often…

Missing attribute values are quite common in the datasets available in the literature. Missing values are also possible because all attributes values may not be recorded and hence unavailable due to several practical reasons. For all these…

Information Retrieval · Computer Science 2016-05-04 Yelipe UshaRani , P. Sammulal

Regular medical records are useful for medical practitioners to analyze and monitor patient health status especially for those with chronic disease, but such records are usually incomplete due to unpunctuality and absence of patients. In…

Many clustering algorithms when the data are curves or functions have been recently proposed. However, the presence of contamination in the sample of curves can influence the performance of most of them. In this work we propose a robust,…

Mixed data comprises both numeric and categorical features, and mixed datasets occur frequently in many domains, such as health, finance, and marketing. Clustering is often applied to mixed datasets to find structures and to group similar…

Machine Learning · Computer Science 2019-03-20 Amir Ahmad , Shehroz S. Khan

In many fields, researchers are interested in large and complex biological processes. Two important examples are gene expression and DNA methylation in genetics. One key problem is to identify aberrant patterns of these processes and…

Applications · Statistics 2012-10-03 Matthias Kormaksson , James G. Booth , Maria E. Figueroa , Ari Melnick

In high-dimension, low-sample size (HDLSS) data, it is not always true that closeness of two objects reflects a hidden cluster structure. We point out the important fact that it is not the closeness, but the "values" of distance that…

Machine Learning · Statistics 2013-12-30 Yoshikazu Terada

Compressive sensing (CS) is a promising technology for realizing energy-efficient wireless sensors for long-term health monitoring. In this paper, we propose a data-driven CS framework that learns signal characteristics and individual…

Information Theory · Computer Science 2016-12-20 Kai Xu , Yuhao Wang , Yixing Li , Fengbo Ren

Missing observations are common in cluster randomised trials. Approaches taken to handling such missing data include: complete case analysis, single-level multiple imputation that ignores the clustering, multiple imputation with a fixed…

Methodology · Statistics 2014-07-18 Karla Diaz-Ordaz , Michael G. Kenward , Manuel Gomes , Richard Grieve

Spectral clustering refers to a family of unsupervised learning algorithms that compute a spectral embedding of the original data based on the eigenvectors of a similarity graph. This non-linear transformation of the data is both the key of…

Machine Learning · Computer Science 2019-01-30 Nicolas Tremblay , Andreas Loukas

Information about the spatiotemporal flow of humans within an urban context has a wide plethora of applications. Currently, although there are many different approaches to collect such data, there lacks a standardized framework to analyze…

Machine Learning · Computer Science 2020-12-23 Zann Koh , Yuren Zhou , Billy Pik Lik Lau , Chau Yuen , Bige Tuncer , Keng Hua Chong

The performance of most the clustering methods hinges on the used pairwise affinity, which is usually denoted by a similarity matrix. However, the pairwise similarity is notoriously known for its vulnerability of noise contamination or the…

Machine Learning · Computer Science 2020-06-29 Hong Peng , Yu Hu , Jiazhou Chen , Haiyan Wang , Yang Li , Hongmin Cai

Unsupervised machine learning, and in particular data clustering, is a powerful approach for the analysis of datasets and identification of characteristic features occurring throughout a dataset. It is gaining popularity across scientific…

Mesoscale and Nanoscale Physics · Physics 2021-03-23 Maria El Abbassi , Jan Overbeck , Oliver Braun , Michel Calame , Herre S. J. van der Zant , Mickael L. Perrin

Cluster analysis methods seek to partition a data set into homogeneous subgroups. It is useful in a wide variety of applications, including document processing and modern genetics. Conventional clustering methods are unsupervised, meaning…

Methodology · Statistics 2014-07-11 Eric Bair

This report explores the application of machine learning techniques on short timeseries gene expression data. Although standard machine learning algorithms work well on longer time-series', they often fail to find meaningful insights from…

Genomics · Quantitative Biology 2021-11-17 Akankshita Dash

There is often a mixture of very frequent labels and very infrequent labels in multi-label datatsets. This variation in label frequency, a type class imbalance, creates a significant challenge for building efficient multi-label…

Machine Learning · Computer Science 2021-09-28 Payel Sadhukhan , Arjun Pakrashi , Sarbani Palit , Brian Mac Namee

Conventional multi-view clustering seeks to partition data into respective groups based on the assumption that all views are fully observed. However, in practical applications, such as disease diagnosis, multimedia analysis, and…

Machine Learning · Computer Science 2022-08-18 Jie Wen , Zheng Zhang , Lunke Fei , Bob Zhang , Yong Xu , Zhao Zhang , Jinxing Li