English
Related papers

Related papers: A Logical Framework for Systems Biology

200 papers

In this paper, we analyze timed systems with data structures, using a rich interplay of logic and properties of graphs. We start by describing behaviors of timed systems using graphs with timing constraints. Such a graph is called…

Logic in Computer Science · Computer Science 2019-04-30 S. Akshay , Paul Gastin , Vincent Juge , Shankara Narayanan Krishna

Automated theorem proving is essential for the formal verification of safety-critical systems. As the corpus of formal proofs grows, a natural paradigm is to learn from existing proofs. However, current learning-based approaches…

Software Engineering · Computer Science 2026-05-12 Jian Fang , Yixun Yao , Yingfei Xiong

We present an approach for the verification of feed-forward neural networks in which all nodes have a piece-wise linear activation function. Such networks are often used in deep learning and have been shown to be hard to verify for modern…

Logic in Computer Science · Computer Science 2017-08-03 Ruediger Ehlers

Compositional verification algorithms are well-studied in the context of model checking. Properly selecting components for verification is important for efficiency, yet has received comparatively less attention. In this paper, we address…

Formal Languages and Automata Theory · Computer Science 2024-08-19 Ian Dardik , April Porter , Eunsuk Kang

This paper presents the deductive formal verification of high-level properties of control systems with theorem proving, using the Why3 tool. Properties that can be verified with this approach include stability, feedback gain, and…

Systems and Control · Computer Science 2014-10-22 Dejanira Araiza-Illan , Kerstin Eder , Arthur Richards

Membrane systems are a biologically-inspired computational model based on the structure of biological cells and the way chemicals interact and traverse their membranes. Although their dynamics are described by rules, encoding membrane…

Logic in Computer Science · Computer Science 2024-01-17 Rubén Rubio , Narciso Martí-Oliet , Isabel Pita , Alberto Verdejo

We present a semantic framework for the deductive verification of hybrid systems with Isabelle/HOL. It supports reasoning about the temporal evolutions of hybrid programs in the style of differential dynamic logic modelled by flows or…

Logic in Computer Science · Computer Science 2021-09-21 Jonathan Julián Huerta y Munive , Georg Struth

The need to model and analyse dynamic systems operating over complex data is ubiquitous in AI and neighboring areas, in particular business process management. Analysing such data-aware systems is a notoriously difficult problem, as they…

Logic in Computer Science · Computer Science 2023-10-20 Alessandro Gianola , Marco Montali , Sarah Winkler

Programmable Logic Controllers (PLCs) are widely used in industrial automation to control physical systems. As PLC applications become increasingly complex, ensuring their correctness is crucial. Existing formal verification techniques…

Programming Languages · Computer Science 2025-07-22 Jaeseo Lee , Kyungmin Bae

Effectively translating between natural language (NL) and formal logics like Linear Temporal Logic (LTL) requires expertise that limits formal verification's reach in safety-critical development. Template-based approaches sacrifice…

Artificial Intelligence · Computer Science 2026-05-25 Paapa Kwesi Quansah , Ernest Bonnah

The design of a complex system warrants a compositional methodology, i.e., composing simple components to obtain a larger system that exhibits their collective behavior in a meaningful way. We propose an automaton-based paradigm for…

Logic in Computer Science · Computer Science 2023-02-03 Tobias Kappé , Farhad Arbab , Carolyn Talcott

As LLM-based agents increasingly operate in high-stakes domains with real-world consequences, ensuring their behavioral safety becomes paramount. The dominant oversight paradigm, LLM-as-a-Judge, faces a fundamental dilemma: how can…

Artificial Intelligence · Computer Science 2026-02-13 Jiayi Zhou , Yang Sheng , Hantao Lou , Yaodong Yang , Jie Fu

We propose a modular method for proving termination of general logic programs (i.e., logic programs with negation). It is based on the notion of acceptable programs, but it allows us to prove termination in a truly modular way. We consider…

Logic in Computer Science · Computer Science 2025-06-18 Annalisa Bossi , Nicoletta Cocco , Sandro Etalle , Sabina Rossi

We introduce a term algebra as a new formal specification language for the coordinating architectures of distributed systems consisting of a finite yet unbounded number of components. The language allows to describe infinite sets of systems…

Formal Languages and Automata Theory · Computer Science 2020-10-15 Marius Bozga , Radu Iosif

We survey dynamic logics for specifying and verifying properties of dynamical systems, including hybrid systems, distributed hybrid systems, and stochastic hybrid systems. A dynamic logic is a first-order modal logic with a pair of…

Logic in Computer Science · Computer Science 2021-06-07 André Platzer

Legal reasoning requires both precise interpretation of statutory language and consistent application of complex rules, presenting significant challenges for AI systems. This paper introduces a modular multi-agent framework that decomposes…

Artificial Intelligence · Computer Science 2025-11-11 Albert Sadowski , Jarosław A. Chudziak

Neural network controllers have shown potential in achieving superior performance in feedback control systems. Although a neural network can be trained efficiently using deep and reinforcement learning methods, providing formal guarantees…

Optimization and Control · Mathematics 2024-01-10 Han Wang , Zuxun Xiong , Liqun Zhao , Antonis Papachristodoulou

Neurosymbolic approaches can add robustness to opaque neural systems by incorporating explainable symbolic representations. However, previous approaches have not used formal logic to contextualize queries to and validate outputs of large…

Computation and Language · Computer Science 2024-09-19 Priyesh Vakharia , Abigail Kufeldt , Max Meyers , Ian Lane , Leilani Gilpin

Logical specifications are widely used to represent software systems and their desired properties. Under system degradation or environmental changes, commonly seen in complex real-world robotic systems, these properties may no longer hold…

Logic in Computer Science · Computer Science 2025-10-20 Ben M. Andrew

In this paper, we investigate the diagnosability verification problem of partially-observed discrete-event systems (DES) subject to unreliable sensors. In this setting, upon the occurrence of each event, the sensor reading may be…

Systems and Control · Electrical Eng. & Systems 2022-04-28 Weijie Dong , Xiang Yin , Shaoyuan Li
‹ Prev 1 4 5 6 7 8 10 Next ›