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Masked autoencoders (MAEs) have recently shown promise for self-supervised representation learning of resting-state brain functional connectivity (FC). However, a fundamental question remains unresolved: how should FC matrices be tokenized…

Artificial Intelligence · Computer Science 2026-05-20 Leo Milecki , Qingyu Hu , Bahram Jafrasteh , Mert R. Sabuncu , Qingyu Zhao

Intrinsic connectivity networks (ICNs) are specific dynamic functional brain networks that are consistently found under various conditions including rest and task. Studies have shown that some stimuli actually activate intrinsic…

Applications · Statistics 2021-07-21 Meini Tang , Chee-Ming Ting , Hernando Ombao

Semantic segmentation of neuronal structures in 3D high-resolution fluorescence microscopy imaging of the human brain cortex can take advantage of bidimensional CNNs, which yield good results in neuron localization but lead to inaccurate…

Image and Video Processing · Electrical Eng. & Systems 2020-09-03 Filippo Maria Castelli , Matteo Roffilli , Giacomo Mazzamuto , Irene Costantini , Ludovico Silvestri , Francesco Saverio Pavone

With the increasing penetration of renewable energy, frequency response and its security are of significant concerns for reliable power system operations. Frequency-constrained unit commitment (FCUC) is proposed to address this challenge.…

Systems and Control · Electrical Eng. & Systems 2021-10-14 Yichen Zhang , Hantao Cui , Jianzhe Liu , Feng Qiu , Tianqi Hong , Rui Yao , Fangxing Li

Recent neuroimaging studies have shown that functional connectomes are unique to individuals, i.e., two distinct fMRIs taken over different sessions of the same subject are more similar in terms of their connectomes than those from two…

Computer Vision and Pattern Recognition · Computer Science 2019-08-12 Vikram Ravindra , Petros Drineas , Ananth Grama

Bosonic or continuous-variable coding is a field concerned with robust quantum information processing and communication with electromagnetic signals or mechanical modes. I review bosonic quantum memories, characterizing them as either…

Quantum Physics · Physics 2025-01-28 Victor V. Albert

Artificially generated induced pluripotent stem cells (iPSCs) from somatic cells play an important role for disease modeling and drug screening of neurodegenerative diseases. Astrocytes differentiated from iPSCs are important targets to…

Image and Video Processing · Electrical Eng. & Systems 2024-02-07 Haoran Li , Jiahua Shi , Huaming Chen , Bo Du , Simon Maksour , Gabrielle Phillips , Mirella Dottori , Jun Shen

We propose a novel technique to incorporate attention within convolutional neural networks using feature maps generated by a separate convolutional autoencoder. Our attention architecture is well suited for incorporation with deep…

Computer Vision and Pattern Recognition · Computer Science 2019-02-11 Chaitanya Kaul , Suresh Manandhar , Nick Pears

The current neuron reconstruction pipeline for electron microscopy (EM) data usually includes automatic image segmentation followed by extensive human expert proofreading. In this work, we aim to reduce human workload by predicting…

Computer Vision and Pattern Recognition · Computer Science 2024-01-09 Qihua Chen , Xuejin Chen , Chenxuan Wang , Yixiong Liu , Zhiwei Xiong , Feng Wu

Generally, microscopy image analysis in biology relies on the segmentation of individual nuclei, using a dedicated stained image, to identify individual cells. However stained nuclei have drawbacks like the need for sample preparation, and…

Image and Video Processing · Electrical Eng. & Systems 2022-11-08 Gendarme Mathieu , Lambert Annika M. , El Debs Bachir

Neural Audio Codecs (NACs) have become increasingly adopted in speech processing tasks due to their excellent rate-distortion performance and compatibility with Large Language Models (LLMs) as discrete feature representations for audio…

Sound · Computer Science 2025-09-15 Harry Julian , Rachel Beeson , Lohith Konathala , Johanna Ulin , Jiameng Gao

The challenge of fine-grained visual recognition often lies in discovering the key discriminative regions. While such regions can be automatically identified from a large-scale labeled dataset, a similar method might become less effective…

Computer Vision and Pattern Recognition · Computer Science 2022-08-02 Yangyang Shu , Baosheng Yu , Haiming Xu , Lingqiao Liu

Functional Magnetic Resonance Imaging (fMRI) is an imaging technique widely used to study human brain activity. fMRI signals in areas across the brain transiently synchronise and desynchronise their activity in a highly structured manner,…

Machine Learning · Computer Science 2025-08-12 Yiran Huang , Amirhossein Nouranizadeh , Christine Ahrends , Mengjia Xu

Machine learning (ML) is increasingly used in network data planes for advanced traffic analysis, but existing solutions (such as FlowLens, N3IC, BoS) still struggle to simultaneously achieve low latency, high throughput, and high accuracy.…

Networking and Internet Architecture · Computer Science 2025-10-15 Xiangyu Gao , Tong Li , Yinchao Zhang , Ziqiang Wang , Xiangsheng Zeng , Su Yao , Ke Xu

Whole-brain computational modeling based on structural connectivity has shown great promise in successfully simulating fMRI BOLD signals with temporal co-activation patterns that are highly similar to empirical functional connectivity…

Neurons and Cognition · Quantitative Biology 2019-11-14 Neda Kaboodvand , Martijn P van den Heuvel , Peter Fransson

Brain regions are often topographically connected: nearby locations within one brain area connect with nearby locations in another area. Mapping these connection topographies, or 'connectopies' in short, is crucial for understanding how…

Quantitative Methods · Quantitative Biology 2017-07-18 Koen V. Haak , Andre F. Marquand , Christian F. Beckmann

In this paper, we present a novel and versatile method to study the dynamics of resting-state fMRI brain connectivity with a high temporal sensitivity. Whereas most existing methods often rely on dividing the time-series into larger…

Neurons and Cognition · Quantitative Biology 2016-01-14 William Hedley Thompson , Peter Fransson

Brain science is an evolving research area inviting great enthusiasm with its potential for providing insights and thereby, preventing, and treating multiple neuronal disorders affecting millions of patients. Discovery of relationships,…

Neurons and Cognition · Quantitative Biology 2016-03-17 Bisakha Ray , Alexander V. Alekseyenko , Sisi Ma , Alexander Statnikov , Constantin Aliferis

The development of foundation models for functional magnetic resonance imaging (fMRI) time series holds significant promise for predicting phenotypes related to disease and cognition. Current models, however, are often trained using a…

Machine Learning · Computer Science 2026-03-03 Sam Gijsen , Marc-Andre Schulz , Kerstin Ritter

In the field of connectomics, neuroscientists seek to identify cortical connectivity comprehensively. Neuronal boundary detection from the Electron Microscopy (EM) images is often done to assist the automatic reconstruction of neuronal…

Computer Vision and Pattern Recognition · Computer Science 2017-08-01 Wei Shen , Bin Wang , Yuan Jiang , Yan Wang , Alan Yuille