Related papers: Semi-algebraic geometry of common lines
Similar to linear spaces, many examples of quasilinear spaces have a notion of multiplication of the elements. To characterising these examples, in the present paper we generalize the notion of quasilinear spaces and introduce…
Graphene is known as a two-dimensional Dirac semimetal, in which electron states are described by the Dirac equation of relativistic quantum mechanics. Three-dimensional analogues of graphene are characterized by Dirac points or lines in…
Three-dimensional volumetric imaging of cells allows for in situ visualization, thus preserving contextual insights into cellular processes. Despite recent advances in machine learning methods, morphological analysis of sub-nuclear…
Scanning Transmission Electron Microscopy (STEM) offers high-resolution images that are used to quantify the nanoscale atomic structure and composition of materials and biological specimens. In many cases, however, the resolution is limited…
Electron tomography is a technique used in both materials science and structural biology to image features well below optical resolution limit. In this work, we present a new algorithm for reconstructing the three-dimensional(3D)…
We use ab initio density functional theory to study the equilibrium geometry and electronic structure of few-layer grey arsenic. In contrast to the bulk structure that is semimetallic, few-layer grey As displays a significant band gap that…
We characterize the canonical algebras such that for all dimension vectors of homogeneous modules the corresponding module varieties are complete intersections (respectively, normal). We also investigate the sets of common zeros of…
Cryo-electron microscopy (cryo-EM) is a powerful technique in structural biology and drug discovery, enabling the study of biomolecules at high resolution. Significant advancements by structural biologists using cryo-EM have led to the…
The method of common lines is a well-established reconstruction technique in cryogenic electron microscopy (cryo-EM), which can be used to extract the relative orientations of an object given tomographic projection images from different…
We introduce a class of graphs with coloured edges to encode subsystems of the classical root systems, which in particular classify them up to equivalence. We further use the graphs to describe root-kernel intersections, as well as…
A coordinate cone in R^n is an intersection of some coordinate hyperplanes and open coordinate half-spaces. A semi-monotone set is a defnable in an o-minimal structure over the reals, open bounded subset of R^n such that its intersection…
One of the difficulties in 3D reconstruction of molecules from images in single particle Cryo-Electron Microscopy (Cryo-EM), in addition to high levels of noise and unknown image orientations, is heterogeneity in samples: in many cases, the…
Single-particle cryo-electron microscopy (cryo-EM) reconstructs the three-dimensional (3D) structure of bio-molecules from a large set of 2D projection images with random and unknown orientations. A crucial step in the single-particle…
If $L$ is a semisimple Lie algebra of vector fields on R^N with a split Cartan subalgebra C, then it is proved that the dimension of the generic orbit of C coincides with the dimension of C. As a consequence one obtains a local canonical…
We introduce the concept of a semigroup coupled cell network and show that the collection of semigroup network vector fields forms a Lie algebra. This implies that near a dynamical equilibrium the local normal form of a semigroup network is…
Molecular Mechanics describes molecules as particle configurations interacting via classical potentials. These {\it configurational energies} usually consist of the sum of different phenomenological terms which are tailored to the…
The relations between the hidden symmetries of the six-dimensional pseudo-Euclidean space with signature (+++ -- ) and the conserved quantum characteristics of elementary particles is established. The hidden symmetries are brought out by…
A semi-algebraic set is a subset of $\mathbb{R}^n$ defined by a finite collection of polynomial equations and inequalities. In this paper, we investigate the problem of determining whether two points in such a set belong to the same…
Laser-induced electron diffraction is an evolving tabletop method, which aims to image ultrafast structural changes in gas-phase polyatomic molecules with sub-{\AA}ngstr\"om spatial and femtosecond temporal resolution. Here, we provide the…
We present a criterion of local Normal Embedding of a semialgebraic (or definable in an o-minimal structure) contained in $R^n$ in terms orders of contact of arcs. Namely, we prove that a semialgebraic set is normally embedded at a point x…