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The problem of the phonon bottleneck in the relaxation of two-level systems (spins) to a narrow group of resonant phonons via emission-absorption processes is investigated from the first principles. It is shown that the kinetic approach…
Molecular electronic devices currently serve as a platform for studying a variety of physical phenomena only accessible at the nanometer scale. One such phenomenon is the highly correlated electronic state responsible for the Kondo effect,…
The transduction process that occurs in the inner ear of the auditory system is a complex mechanism which requires a non-linear dynamical description. In addition to this, the stochastic phenomena that naturally arise in the inner ear…
We develop a formalism to describe the discrete-time dynamics of systems containing an arbitrary number of interacting species. The individual-based model, which forms our starting point, is described by a Markov chain, which in the limit…
We describe a mechanism for pronounced biochemical oscillations, relevant to microscopic systems, such as the intracellular environment. This mechanism operates for reaction schemes which, when modeled using deterministic rate equations,…
We present a new method for parameter identification of ODE system descriptions based on data measurements. Our method works by splitting the system into a number of subsystems and working on each of them separately, thereby being easily…
Monitoring respiration parameters such as respiratory rate could be beneficial to understand the impact of training on equine health and performance and ultimately improve equine welfare. In this work, we compare deep learning-based methods…
Hundreds of applications utilize frequency response characterization of a system. Identification of frequency response requires long experimentation time, use of transformation techniques and other difficulties associated with isolating the…
Measurement in biological systems became a subject of concern as a consequence of numerous reports on limited reproducibility of experimental results. To reveal origins of this inconsistency, we have examined general features of biological…
Fano mechanism is the universal explanation of asymmetric resonance appearing in different systems. We report the evidence of Fano-like resonance in selective reflection from a resonant two-level medium. We draw an analogy with the…
Ocean dynamics play a crucial role in global climate, ecosystems, and human activities, necessitating accurate and efficient methods to characterize ocean currents and waves. This paper presents the development of a novel bio-inspired…
Based on a modified Anderson-Weiss approximation (N. Fatkullin, A. Gubaidullin, C. Mattea, S.Stapf, J. Chem. Phys. 137 (2012), 224907) an improved theory of proton spin solid echo in polymer melts is formulated, taking into account…
Behavior analysis of animals involves the observation of intraspecific and interspecific interactions among various organisms in the environment. Collective behavior such as herding in farm animals, flocking of birds, and shoaling and…
A fundamental question in complex systems is how to relate interactions between individual components ("microscopic description") to the global properties of the system ("macroscopic description"). Another fundamental question is whether…
We introduce a novel approach to studying animal behaviour and the context in which it occurs, through the use of microphone backpacks carried on the backs of individual free-flying birds. These sensors are increasingly used by animal…
We examine the question of whether it is possible for a diagonalizing system, to learn to use environmental reward and punishment as an information, in order to appropriately adapt. More specifically, we study the possiblity of such a…
Deep phenotyping study has become an emerging field to understand the gene function and the structure of biological networks. For the living animal C. elegans, recent advances in genome-editing tools, microfluidic devices and phenotypic…
Rhythmic and sequential segmentation of the embryonic body plan is a vital developmental patterning process in all vertebrate species. However, a theoretical framework capturing the emergence of dynamic patterns of gene expression from the…
A hidden Markov process is a well known concept in information theory and is used for a vast range of applications such as speech recognition and error correction. We bridge between two disciplines, experimental physics and advanced…
We present an interpretation of Deepcode, a learned feedback code that showcases higher-order error correction relative to an earlier interpretable model. By interpretation, we mean succinct analytical encoder and decoder expressions…