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Fast Radio Bursts (FRBs) are millisecond-duration radio transients of extragalactic origin. Classifying repeating FRBs is essential for understanding their emission mechanisms, but remains challenging due to their short durations, high…

High Energy Astrophysical Phenomena · Physics 2026-01-23 An-Chieh Hsu , Tetsuya Hashimoto , Tomotsugu Goto , Tomoki Wada , Bjorn Jasper Raquel

Fast Radio Bursts (FRBs) are millisecond-duration radio transients of extragalactic origin, exhibiting a wide range of physical and observational properties. Distinguishing between repeating and non-repeating FRBs remains a key challenge in…

This paper proposes an automated method to detect, group and rectify arbitrarily-arranged coplanar repeated elements via energy minimization. The proposed energy functional combines several features that model how planes with coplanar…

Computer Vision and Pattern Recognition · Computer Science 2017-11-29 James Pritts , Denys Rozumnyi , M. Pawan Kumar , Ondrej Chum

Segmental duplications (SDs), or low-copy repeats (LCR), are segments of DNA greater than 1 Kbp with high sequence identity that are copied to other regions of the genome. SDs are among the most important sources of evolution, a common…

Data Structures and Algorithms · Computer Science 2018-09-25 Ibrahim Numanagić , Alim S. Gökkaya , Lillian Zhang , Bonnie Berger , Can Alkan , Faraz Hach

Persistence diagrams, combining geometry and topology for an effective shape description used in pattern recognition, have already proven to be an effective tool for shape representation with respect to a certainfiltering function.…

Algebraic Topology · Mathematics 2018-12-26 Alessia Angeli , Massimo Ferri , Ivan Tomba

Various face image datasets intended for facial biometrics research were created via web-scraping, i.e. the collection of images publicly available on the internet. This work presents an approach to detect both exactly and nearly identical…

Computer Vision and Pattern Recognition · Computer Science 2024-03-07 Torsten Schlett , Christian Rathgeb , Juan Tapia , Christoph Busch

The Exact Circular Pattern Matching (ECPM) problem consists of reporting every occurrence of a rotation of a pattern $P$ in a text $T$. In many real-world applications, specifically in computational biology, circular rotations are of…

Data Structures and Algorithms · Computer Science 2022-04-21 Will Solow , Matthew Barich , Brendan Mumey

Fast Radio Bursts (FRBs) are highly energetic millisecond-duration astrophysical phenomena typically categorized as repeaters or non-repeaters. However, observational limitations may result in misclassifications, potentially leading to a…

High Energy Astrophysical Phenomena · Physics 2025-04-16 Da-Chun Qiang , Jie Zheng , Zhi-Qiang You , Sheng Yang

Image-based sequencing of mRNA makes it possible to see where in a tissue sample a given gene is active, and thus discern large numbers of different cell types in parallel. This is crucial for gaining a better understanding of tissue…

Quantitative Methods · Quantitative Biology 2018-02-27 Gabriele Partel , Giorgia Milli , Carolina Wählby

In this paper a novel biclustering algorithm based on artificial intelligence (AI) is introduced. The method called EBIC aims to detect biologically meaningful, order-preserving patterns in complex data. The proposed algorithm is probably…

Machine Learning · Computer Science 2018-07-27 Patryk Orzechowski , Moshe Sipper , Xiuzhen Huang , Jason H. Moore

Fast radio bursts (FRBs) are millisecond-duration extragalactic transients, observationally classified as repeaters or nonrepeaters. This classification may be biased, as some apparently non-repeating sources could simply have undetected…

High Energy Astrophysical Phenomena · Physics 2025-12-09 N. Mankatwit , P. Thongkonsing , S. Loekkesee , P. Chainakun , W. Luangtip , S. Sanpa-arsa

Embedding-based retrieval (EBR) methods are widely used in modern recommender systems thanks to its simplicity and effectiveness. However, along the journey of deploying and iterating on EBR in production, we still identify some fundamental…

Information Retrieval · Computer Science 2023-02-07 Yuan Zhang , Xue Dong , Weijie Ding , Biao Li , Peng Jiang , Kun Gai

The ability to quickly and accurately identify microbial species in a sample, known as metagenomic profiling, is critical across various fields, from healthcare to environmental science. This paper introduces a novel method to profile…

Genomics · Quantitative Biology 2025-04-10 Riselda Kodra , Hadjer Benmeziane , Irem Boybat , William Andrew Simon

The problem of finding aperiodic low auto-correlation binary sequences (LABS) presents a significant computational challenge, particularly as the sequence length increases. Such sequences have important applications in communication…

Data Structures and Algorithms · Computer Science 2025-05-27 Blaž Pšeničnik , Rene Mlinarič , Janez Brest , Borko Bošković

This paper describes a method to efficiently retrieve protein database sequences similar to a query sequence, while allowing for significant numbers of mutations. We call this method SEQR for SEQuence Retrieval. This approach increases the…

Genomics · Quantitative Biology 2018-11-05 David I. Hurwitz , Lianyi Han , Lewis Y. Geer

Sequence-based protein homology detection has been extensively studied and so far the most sensitive method is based upon comparison of protein sequence profiles, which are derived from multiple sequence alignment (MSA) of sequence homologs…

Quantitative Methods · Quantitative Biology 2015-06-18 Jianzhu Ma , Sheng Wang , Zhiyong Wang , Jinbo Xu

Machine learning and data mining techniques have been used extensively in order to detect credit card frauds. However, most studies consider credit card transactions as isolated events and not as a sequence of transactions. In this article,…

Current popular methods for Magnetic Resonance Fingerprint (MRF) recovery are bottlenecked by the heavy computations of a matched-filtering step due to the growing size and complexity of the fingerprint dictionaries in multi-parametric…

Computer Vision and Pattern Recognition · Computer Science 2018-10-05 Mohammad Golbabaee , Zhouye Chen , Yves Wiaux , Mike Davies

Symmetry is prevalent in nature and a common theme in man-made designs. Both the human visual system and computer vision algorithms can use symmetry to facilitate object recognition and other tasks. Detecting mirror symmetry in images and…

Computer Vision and Pattern Recognition · Computer Science 2017-04-03 Marcelo Cicconet , David G. C. Hildebrand , Hunter Elliott

For more than twenty years, Ray Tracing methods have continued to improve on both accuracy and computational time aspects. However, most state-of-the-art image-based ray tracers still rely on a description of the environment that only…

Signal Processing · Electrical Eng. & Systems 2024-01-23 Jérome Eertmans , Claude Oestges , Laurent Jacques