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We present a simple $O(n^4)$-time algorithm for computing optimal search trees with two-way comparisons. The only previous solution to this problem, by Anderson et al., has the same running time, but is significantly more complicated and is…

Data Structures and Algorithms · Computer Science 2022-02-14 Marek Chrobak , Mordecai Golin , J. Ian Munro , Neal E. Young

Squares (fragments of the form $xx$, for some string $x$) are arguably the most natural type of repetition in strings. The basic algorithmic question concerning squares is to check if a given string of length $n$ is square-free, that is,…

Data Structures and Algorithms · Computer Science 2023-03-14 Jonas Ellert , Paweł Gawrychowski , Garance Gourdel

We revisit the problem of longest common property preserving substring queries introduced by~Ayad et al. (SPIRE 2018, arXiv 2018). We consider a generalized and unified on-line setting, where we are given a set $X$ of $k$ strings of total…

Data Structures and Algorithms · Computer Science 2019-06-14 Kazuki Kai , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda , Tomasz Kociumaka

Geometric data structures have been extensively studied in the regime where the dimension is much smaller than the number of input points. But in many scenarios in Machine Learning, the dimension can be much higher than the number of points…

Data Structures and Algorithms · Computer Science 2025-04-07 Martin G. Herold , Danupon Nanongkai , Joachim Spoerhase , Nithin Varma , Zihang Wu

Let $\mathcal{D}$ be a collection of $D$ documents, which are strings over an alphabet of size $\sigma$, of total length $n$. We describe a data structure that uses linear space and and reports $k$ most relevant documents that contain a…

Data Structures and Algorithms · Computer Science 2013-08-02 Gonzalo Navarro , Yakov Nekrich

We revisit the longest common extension (LCE) problem, that is, preprocess a string $T$ into a compact data structure that supports fast LCE queries. An LCE query takes a pair $(i,j)$ of indices in $T$ and returns the length of the longest…

Data Structures and Algorithms · Computer Science 2013-04-23 Philip Bille , Inge Li Goertz , Benjamin Sach , Hjalte Wedel Vildhøj

In this paper we investigate the problem of building a static data structure that represents a string s using space close to its compressed size, and allows fast access to individual characters of s. This type of structures was investigated…

Computational Complexity · Computer Science 2012-05-04 Shiteng Chen , Elad Verbin , Wei Yu

We consider the canonical Subset Sum problem: given a list of positive integers $a_1,\ldots,a_n$ and a target integer $t$ with $t > a_i$ for all $i$, determine if there is an $S \subseteq [n]$ such that $\sum_{i \in S} a_i = t$. The…

Data Structures and Algorithms · Computer Science 2020-11-10 Ce Jin , Nikhil Vyas , Ryan Williams

The longest common extension problem (LCE problem) is to construct a data structure for an input string $T$ of length $n$ that supports LCE$(i,j)$ queries. Such a query returns the length of the longest common prefix of the suffixes…

Data Structures and Algorithms · Computer Science 2015-04-13 Philip Bille , Inge Li Gørtz , Mathias Bæk Tejs Knudsen , Moshe Lewenstein , Hjalte Wedel Vildhøj

We prove that longest common prefix (LCP) information can be stored in much less space than previously known. More precisely, we show that in the presence of the text and the suffix array, o(n) additional bits are sufficient to answer…

Data Structures and Algorithms · Computer Science 2010-02-19 Johannes Fischer

Given a set of $n$ points in the Euclidean plane, such that just $k$ points are strictly inside the convex hull of the whole set, we want to find the shortest tour visiting every point. The fastest known algorithm for the version when $k$…

Data Structures and Algorithms · Computer Science 2014-06-10 Pawel Gawrychowski , Damian Rusak

Given a multiset $S$ of $n$ positive integers and a target integer $t$, the subset sum problem is to decide if there is a subset of $S$ that sums up to $t$. We present a new divide-and-conquer algorithm that computes all the realizable…

Data Structures and Algorithms · Computer Science 2016-12-13 Konstantinos Koiliaris , Chao Xu

In this paper, we consider a generalized longest common subsequence problem with multiple substring inclusive constraints. For the two input sequences $X$ and $Y$ of lengths $n$ and $m$, and a set of $d$ constraints $P=\{P_1,\cdots,P_d\}$…

Data Structures and Algorithms · Computer Science 2015-05-26 Daxin Zhu , Lei Wang , Yingjie Wu , Xiaodong Wang

Given a string of length $n$ that is composed of $r$ runs of letters from the alphabet $\{0,1,\ldots,\sigma{-}1\}$ such that $2 \le \sigma \le r$, we describe a data structure that, provided $r \le n / \log^{\omega(1)} n$, stores the string…

Data Structures and Algorithms · Computer Science 2018-02-27 José Fuentes-Sepúlveda , Juha Kärkkäinen , Dmitry Kosolobov , Simon J. Puglisi

We show that the compressed suffix array and the compressed suffix tree for a string of length $n$ over an integer alphabet of size $\sigma\leq n$ can both be built in $O(n)$ (randomized) time using only $O(n\log\sigma)$ bits of working…

Data Structures and Algorithms · Computer Science 2016-05-24 Djamal Belazzougui

In this paper we describe compressed indexes that support pattern matching queries for strings with wildcards. For a constant size alphabet our data structure uses $O(n\log^{\varepsilon}n)$ bits for any $\varepsilon>0$ and reports all…

Data Structures and Algorithms · Computer Science 2014-01-06 Moshe Lewenstein , Yakov Nekrich , Jeffrey Scott Vitter

Given a pattern string $P$ of length $n$ and a query string $T$ of length $m$, where the characters of $P$ and $T$ are drawn from an alphabet of size $\Delta$, the {\em exact string matching} problem consists of finding all occurrences of…

Data Structures and Algorithms · Computer Science 2015-10-01 Srikrishnan Divakaran

In this paper, we propose a data structure, a quadruple neighbor list (QN-list, for short), to support real time queries of all longest increasing subsequence (LIS) and LIS with constraints over sequential data streams. The QN-List built by…

Data Structures and Algorithms · Computer Science 2016-10-12 Youhuan Li , Lei Zou , Huaming Zhang , Dongyan Zhao

The size of the \textit{smallest suffixient set} of positions of a string recently emerged as a new measure of string \textit{repetitiveness} -- a measure reflecting how much of repetitive content the string contains. We study how to…

Data Structures and Algorithms · Computer Science 2026-05-01 Dominik Köppl , Gregory Kucherov

Let two static sequences of strings $P$ and $S$, representing prefix and suffix conditions respectively, be given as input for preprocessing. For the query, let two positive integers $k_1$ and $k_2$ be given, as well as a string $T$ given…

Data Structures and Algorithms · Computer Science 2022-11-01 Laurentius Leonard , Shunsuke Inenaga , Hideo Bannai , Takuya Mieno