Time-Space Trade-Offs for Longest Common Extensions
Abstract
We revisit the longest common extension (LCE) problem, that is, preprocess a string into a compact data structure that supports fast LCE queries. An LCE query takes a pair of indices in and returns the length of the longest common prefix of the suffixes of starting at positions and . We study the time-space trade-offs for the problem, that is, the space used for the data structure vs. the worst-case time for answering an LCE query. Let be the length of . Given a parameter , , we show how to achieve either space and query time, or space and query time, where denotes the length of the LCE returned by the query. These bounds provide the first smooth trade-offs for the LCE problem and almost match the previously known bounds at the extremes when or . We apply the result to obtain improved bounds for several applications where the LCE problem is the computational bottleneck, including approximate string matching and computing palindromes. We also present an efficient technique to reduce LCE queries on two strings to one string. Finally, we give a lower bound on the time-space product for LCE data structures in the non-uniform cell probe model showing that our second trade-off is nearly optimal.
Keywords
Cite
@article{arxiv.1211.0270,
title = {Time-Space Trade-Offs for Longest Common Extensions},
author = {Philip Bille and Inge Li Goertz and Benjamin Sach and Hjalte Wedel Vildhøj},
journal= {arXiv preprint arXiv:1211.0270},
year = {2013}
}
Comments
A preliminary version of this paper appeared in the proceedings of the 23rd Annual Symposium on Combinatorial Pattern Matching (CPM 2012)