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Human brains lie at the core of complex neurobiological systems, where the neurons, circuits, and subsystems interact in enigmatic ways. Understanding the structural and functional mechanisms of the brain has long been an intriguing pursuit…

Neurons and Cognition · Quantitative Biology 2022-07-26 Hejie Cui , Wei Dai , Yanqiao Zhu , Xiaoxiao Li , Lifang He , Carl Yang

Many real-world phenomena are naturally modeled by graphs and networks. However, classical graph models are often limited to pairwise interactions and may not adequately capture the richer structures that arise in practice. Higher-order…

Social and Information Networks · Computer Science 2026-05-18 Takaaki Fujita , Florentin Smarandache

Complex scenes present significant challenges for predicting human behaviour due to the abundance of interaction information, such as human-human and humanenvironment interactions. These factors complicate the analysis and understanding of…

Computer Vision and Pattern Recognition · Computer Science 2026-04-02 Caiyi Sun , Yujing Sun , Xiao Han , Zemin Yang , Jiawei Liu , Xinge Zhu , Siu Ming Yiu , Yuexin Ma

We present Arianna+, a framework to design networks of ontologies for representing knowledge enabling smart homes to perform human activity recognition online. In the network, nodes are ontologies allowing for various data…

Artificial Intelligence · Computer Science 2021-05-07 Luca Buoncompagni , Syed Yusha Kareem , Fulvio Mastrogiovanni

In the digital era, users typically interact with diverse items across multiple domains (e.g., e-commerce, streaming platforms, and social networks), generating intricate heterogeneous interaction graphs. Leveraging multi-domain data can…

Information Retrieval · Computer Science 2025-07-11 Hengyu Zhang , Chunxu Shen , Xiangguo Sun , Jie Tan , Yu Rong , Chengzhi Piao , Hong Cheng , Lingling Yi

An ontology is a formal representation of domain knowledge, which can be interpreted by machines. In recent years, ontologies have become a major tool for domain knowledge representation and a core component of many knowledge management…

Artificial Intelligence · Computer Science 2019-06-27 Anat Goldstein , Lior Fink , Gilad Ravid

Entity relation extraction consists of two sub-tasks: entity recognition and relation extraction. Existing methods either tackle these two tasks separately or unify them with word-by-word interactions. In this paper, we propose HIORE, a new…

Computation and Language · Computer Science 2023-05-09 Yijun Wang , Changzhi Sun , Yuanbin Wu , Lei Li , Junchi Yan , Hao Zhou

We introduce ProtoPathway, an interpretable-by-design multimodal framework for cancer survival prediction that unifies whole slide imaging and transcriptomics through encoders producing biologically grounded representations on both sides of…

Computer Vision and Pattern Recognition · Computer Science 2026-05-21 Amaya Gallagher-Syed , Costantino Pitzalis , Myles J. Lewis , Michael R. Barnes , Gregory Slabaugh

We explore the role of ontologies in enhancing hybrid modeling and simulation through improved semantic rigor, model reusability, and interoperability across systems, disciplines, and tools. By distinguishing between methodological and…

Artificial Intelligence · Computer Science 2025-06-17 John Beverley , Andreas Tolk

Vision Foundation Models (VFMs) have advanced representation learning through self-supervised methods. However, existing training pipelines are often inflexible, domain-specific, or computationally expensive, which limits their usability…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Mahmut Selman Gokmen , Cody Bumgardner

The proliferation of high-dimensional datasets in fields such as genomics, healthcare, and finance has created an urgent need for machine learning models that are both highly accurate and inherently interpretable. While traditional deep…

Machine Learning · Computer Science 2025-10-28 Rekha R Nair , Tina Babu , Alavikunhu Panthakkan , Hussain Al-Ahmad , Balamurugan Balusamy

Human vision achieves remarkable perceptual performance while operating under strict metabolic constraints. A key ingredient is the selective attention mechanism, driven by rapid saccadic eye movements that constantly reposition the…

Computer Vision and Pattern Recognition · Computer Science 2026-03-12 Matthis Dallain , Laurent Rodriguez , Laurent Udo Perrinet , Benoît Miramond

Generative models have recently demonstrated remarkable success across diverse domains, motivating their adoption as expressive policies in reinforcement learning (RL). While they have shown strong performance in offline RL, particularly…

Machine Learning · Computer Science 2026-02-23 Yongjae Shin , Jongseong Chae , Jongeui Park , Youngchul Sung

Lipid-protein interactions play essential roles in cellular signaling and membrane dynamics, yet their systematic characterization has long been hindered by the inherent biochemical properties of lipids. Recent advances in functionalized…

Quantitative Methods · Quantitative Biology 2025-08-01 Gaelen Guzman , André Nadler , Frank Stein , Jeremy M. Baskin , Carsten Schultz , Fikadu Tafesse

Developing ontologies can be expensive, time-consuming, as well as difficult to develop and maintain. This is especially true for more expressive and/or larger ontologies. Some ontologies are, however, relatively repetitive, reusing design…

Computational Engineering, Finance, and Science · Computer Science 2013-12-03 Jennifer D. Warrender , Phillip Lord

The use of Implicit Neural Representation (INR) through a hash-table has demonstrated impressive effectiveness and efficiency in characterizing intricate signals. However, current state-of-the-art methods exhibit insufficient…

Computer Vision and Pattern Recognition · Computer Science 2023-09-25 Hao Zhu , Fengyi Liu , Qi Zhang , Xun Cao , Zhan Ma

Modeling human decision-making is central to applications such as recommendation, preference learning, and human-AI alignment. While many classic models assume context-independent choice behavior, a large body of behavioral research shows…

Machine Learning · Computer Science 2026-01-09 Shuhan Zhang , Zhi Wang , Rui Gao , Shuang Li

Ontologies are formal representations of concepts and complex relationships among them. They have been widely used to capture comprehensive domain knowledge in areas such as biology and medicine, where large and complex ontologies can…

Human-Computer Interaction · Computer Science 2019-10-24 Ying Yang , Michael Wybrow , Yuan-Fang Li , Tobias Czauderna , Yongqun He

Detecting human interactions is crucial for human behavior analysis. Many methods have been proposed to deal with Human-to-Object Interaction (HOI) detection, i.e., detecting in an image which person and object interact together and…

Computer Vision and Pattern Recognition · Computer Science 2022-01-27 Astrid Orcesi , Romaric Audigier , Fritz Poka Toukam , Bertrand Luvison

This paper discusses the representation of ontologies in the first-order logical environment {\ttfamily FOLE}. An ontology defines the primitives with which to model the knowledge resources for a community of discourse. These primitives…

Databases · Computer Science 2023-04-25 Robert E. Kent