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When organisms adapt to spatially heterogeneous environments, selection may drive divergence at multiple genes. If populations under divergent selection also exchange migrants, we expect genetic differentiation to be high at selected loci,…

Populations and Evolution · Quantitative Biology 2014-07-21 Simon Aeschbacher , Reinhard Buerger

We numerically investigate the impact of scale evolution on double parton distributions, which are needed to compute multiple hard scattering processes. Assuming correlations between longitudinal and transverse variables or between the…

High Energy Physics - Phenomenology · Physics 2015-06-18 Markus Diehl , Tomas Kasemets , Shane Keane

Coevolution is expected to follow two alternative dynamics, often called trench warfare and arms races in plant-pathogen systems. Trench warfare situations are stable cycles of allele frequencies at the coevolving loci of both host and…

Populations and Evolution · Quantitative Biology 2013-09-20 Aurelien Tellier , Stefany Moreno-Gamez , Wolfgang Stephan

We study existence and stability of stationary solutions of a system of semilinear parabolic partial differential equations that occurs in population genetics. It describes the evolution of gamete frequencies in a geographically structured…

Analysis of PDEs · Mathematics 2018-12-18 Linlin Su , King-Yeung Lam , Reinhard Bürger

The rate of biological evolution depends on the fixation probability and on the fixation time of new mutants. Intensive research has focused on identifying population structures that augment the fixation probability of advantageous mutants.…

Populations and Evolution · Quantitative Biology 2019-03-11 Josef Tkadlec , Andreas Pavlogiannis , Krishnendu Chatterjee , Martin A. Nowak

The preferred conditions for evolutionary innovation is a fundamental question, but little is known, in part because the question involves rare events. We focused on the potential role of polyploidy in the evolution of novel traits. There…

Populations and Evolution · Quantitative Biology 2024-04-16 Tetsuhiro S. Hatakeyama , Ryudo Ohbayashi

Populations can be genetically isolated both by geographic distance and by differences in their ecology or environment that decrease the rate of successful migration. Empirical studies often seek to investigate the relationship between…

Populations and Evolution · Quantitative Biology 2013-09-12 Gideon Bradburd , Peter Ralph , Graham Coop

A simulation model of a population having internal (genetic) structure is presented. The population is subject to selection pressure coming from the environment which is the same in the whole system but changes in time. Reproduction has a…

Adaptation and Self-Organizing Systems · Physics 2012-08-31 Andrzej Pekalski , Marcel Ausloos

Phoneme frequency distributions exhibit robust statistical regularities across languages, including exponential-tailed rank-frequency patterns and a negative relationship between phonemic inventory size and the relative entropy of the…

Computation and Language · Computer Science 2026-03-11 Fermín Moscoso del Prado Martín , Suchir Salhan

The evolution of antimicrobial resistance generally occurs in an environment where antimicrobial concentration is variable, which has dramatic consequences on the microorganisms' fitness landscape, and thus on the evolution of resistance.…

Biological Physics · Physics 2018-10-23 Loïc Marrec , Anne-Florence Bitbol

Species diversity in ecosystems is often accompanied by the self-organisation of the population into fascinating spatio-temporal patterns. Here, we consider a two-dimensional three-species population model and study the spiralling patterns…

Populations and Evolution · Quantitative Biology 2013-05-09 Bartosz Szczesny , Mauro Mobilia , Alastair M. Rucklidge

Empirical observations in marine ecosystems have suggested a balance of biological and advection time scales as a possible explanation of species coexistence. To characterise this scenario, we measure the time to fixation in neutrally…

Populations and Evolution · Quantitative Biology 2018-04-09 Tobias Galla , Vicente Pérez-Muñuzuri

Estimation of the allele frequency at genetic markers is a key ingredient in biological and biomedical research, such as studies of human genetic variation or of the genetic etiology of heritable traits. As genetic data becomes increasingly…

Applications · Statistics 2007-12-18 Marc Coram , Hua Tang

Two major sources of stochasticity in the dynamics of neutral alleles result from resampling of finite populations (genetic drift) and the random genetic background of nearby selected alleles on which the neutral alleles are found (linked…

Populations and Evolution · Quantitative Biology 2013-01-15 Graham Coop , Peter Ralph

We present an individual-based model of phenotypic trait evolution in two-sex populations, which includes semi-random mating of individuals of the opposite sex, natural death and intra-specific competition. By passing the number of…

Probability · Mathematics 2015-02-24 Paweł Zwoleński

In many species, genomic data have revealed pervasive adaptive evolution indicated by the fixation of beneficial alleles. However, when selection pressures are highly variable along a species range or through time adaptive alleles may…

Populations and Evolution · Quantitative Biology 2014-11-10 Alan O. Bergland , Emily L. Behrman , Katherine R. O'Brien , Paul S. Schmidt , Dmitri A. Petrov

We demonstrate the mechanisms of emergence and the link between two types of symmetry-broken states, the unbalanced periodic two-cluster states and solitary states, in coupled excitable systems with prevalent repulsive interactions.…

Adaptation and Self-Organizing Systems · Physics 2022-01-26 Igor Franović , Sebastian Eydam , Nadezhda Semenova , Anna Zakharova

We are interested in the long-time behavior of a diploid population with sexual reproduction, characterized by its genotype composition at one bi-allelic locus. The population is modeled by a 3-dimensional birth-and-death process with…

Probability · Mathematics 2013-09-16 Camille Coron

We study the evolutionary dynamics of a phenotypically structured population in a changing environment , where the environmental conditions vary with a linear trend but in an oscillatory manner. Such phenomena can be described by parabolic…

Analysis of PDEs · Mathematics 2021-05-04 Susely Figueroa Iglesias , Sepideh Mirrahimi

Pervasive natural selection can strongly influence observed patterns of genetic variation, but these effects remain poorly understood when multiple selected variants segregate in nearby regions of the genome. Classical population genetics…

Populations and Evolution · Quantitative Biology 2013-06-06 Benjamin H. Good , Aleksandra M. Walczak , Richard A. Neher , Michael M. Desai
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