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Many cellular patterns exhibit a reaction-diffusion component, suggesting that Turing instability may contribute to pattern formation. However, biological gene-regulatory pathways are more complex than simple Turing activator-inhibitor…

Molecular Networks · Quantitative Biology 2024-12-05 Hazlam S. Ahmad Shaberi , Aibek Kappassov , Antonio Matas-Gil , Robert G. Endres

Pattern formation in reaction-diffusion systems where the diffusion terms correspond to a Sturm-Liouville problem are studied. These correspond to a problem where the diffusion coefficient depends on the spatial variable: $\nabla \cdot…

Pattern Formation and Solitons · Physics 2022-11-28 E. A. Calderón-Barreto , J. L. Aragón

In this paper, a class of reaction-diffusion equations for Multiple Sclerosis is presented. These models are derived by means of a diffusive limit starting from a proper kinetic description, taking account of the underlying microscopic…

Quantitative Methods · Quantitative Biology 2026-01-07 Marzia Bisi , Maria Groppi , Giorgio Martalò , Romina Travaglini

We study a p-adic reaction-diffusion system and the associated Turing patterns. We establish an instability criteria and show that the Turing patterns are not classical patterns consisting of alternating domains. Instead of this, a Turing…

Analysis of PDEs · Mathematics 2021-09-07 W. A. Zúñiga-Galindo

We prove existence and uniqueness of a reaction-diffusion equation whose diffusivity is a non-linear functional of the boundary temperature. We do this by studying systems of one-dimensional reflecting diffusions whose noise is a function…

Probability · Mathematics 2021-07-29 Clayton Barnes

We set up a rigorous thermodynamic description of reaction-diffusion systems driven out of equilibrium by time-dependent space-distributed chemostats. Building on the assumption of local equilibrium, nonequilibrium thermodynamic potentials…

Statistical Mechanics · Physics 2018-09-12 Gianmaria Falasco , Riccardo Rao , Massimiliano Esposito

Turing's theory of pattern formation has been used to describe the formation of self-organised periodic patterns in many biological, chemical and physical systems. However, the use of such models is hindered by our inability to predict, in…

Pattern Formation and Solitons · Physics 2021-02-03 Srikanth Subramanian , Sean M. Murray

Diffusion-coagulation can be simply described by a dynamic where particles perform a random walk on a lattice and coalesce with probability unity when meeting on the same site. Such processes display non-equilibrium properties with strong…

Statistical Mechanics · Physics 2018-03-13 L. Turban , J. -Y. Fortin

Crohn's disease is an inflammatory bowel disease (IBD) that is not well understood. In particular, unlike other IBDs, the inflamed parts of the intestine compromise deep layers of the tissue and are not continuous but separated and…

Analysis of PDEs · Mathematics 2020-07-28 Grégoire Nadin , Eric Ogier-Denis , Ana Isis Toledo , Hatem Zaag

This paper provides the phase transition analysis of a reaction diffusion equations system modeling dynamic instability of microtubules. For this purpose we have generalized the macroscopic model studied by Mour\~ao et all [MSS]. This model…

Analysis of PDEs · Mathematics 2015-06-17 Shantia Yarahmadian , Masoud Yari

We numerically solve the active nematohydrodynamic equations of motion, coupled to a Turing reaction-diffusion model, to study the effect of active nematic flow on the stripe patterns resulting from a Turing instability. If the activity is…

Soft Condensed Matter · Physics 2021-11-04 Saraswat Bhattacharyya , Julia M. Yeomans

We consider the problem of boundary feedback control of single-input-single-output (SISO) one-dimensional linear hyperbolic systems when sensing and actuation are anti-located. The main issue of the output feedback stabilization is that it…

Optimization and Control · Mathematics 2022-12-12 Georges Bastin , Jean-Michel Coron , Amaury Hayat

Gene expression time delays, modelling the complex biological processes of gene transcription and translation, have been shown to play an important role in cellular dynamics. Time delays, motivated by the gene expression process, can also…

Cell Behavior · Quantitative Biology 2022-02-24 Alec Sargood

Turing's mechanism is often invoked to explain periodic patterns in nature, although direct experimental support is scarce. Turing patterns form in reaction-diffusion systems when the activating species diffuse much slower than the…

Biological Physics · Physics 2024-03-15 Lucas Menou , Chengjie Luo , David Zwicker

Hyperbolic reaction-diffusion equations have recently attracted attention both for their application to a variety of biological and chemical phenomena, and for their distinct features in terms of propagation speed and novel instabilities…

Pattern Formation and Solitons · Physics 2022-08-17 Joshua Ritchie , Andrew L. Krause , Robert A. Van Gorder

This paper is concerned with stochastic reaction-diffusion kinetics governed by the reaction-diffusion master equation. Specifically, the primary goal of this paper is to provide a mechanistic basis of Turing pattern formation that is…

Quantitative Methods · Quantitative Biology 2015-04-23 Yutaka Hori , Shinji Hara

We derive a simple sufficient condition for the local asymptotic stability of spatially discrete, continuous-time reaction-diffusion systems of networked dynamical systems at a homogeneous equilibrium point. The framework explicitly…

Dynamical Systems · Mathematics 2026-05-07 Dinesh Kumar

In this article, we carry out a study of long-term behavior of reaction-diffusion systems augmented with self- and cross-diffusion, using an augmented Gray-Scott system as a general example. The methodology remains generic, and is therefore…

Pattern Formation and Solitons · Physics 2023-08-16 Benjamin Aymard

Building Virtual Cells that can accurately simulate cellular responses to perturbations is a long-standing goal in systems biology. A fundamental challenge is that high-throughput single-cell sequencing is destructive: the same cell cannot…

Machine Learning · Computer Science 2026-02-24 Xinyu Yuan , Xixian Liu , Ya Shi Zhang , Zuobai Zhang , Hongyu Guo , Jian Tang

In this paper we obtain uniform propagation estimates for systems of interacting diffusions. We adopt a general model, satisfying various conditions which ensure that the decay resulting from the internal dynamics term dominates the…

Probability · Mathematics 2017-02-24 Jamil Salhi , James MacLaurin , Salwa Toumi
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