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This study addresses ductile fracture of single grains in metals by modeling of the formation and propagation of transgranular cracks. A proposed model integrates gradient extended hardening, phase-field modeling for fracture, and crystal…

Numerical Analysis · Mathematics 2024-11-01 Kim Louisa Auth , Jim Brouzoulis , Magnus Ekh

The dynamic behavior of microtubules in solution can be strongly modified by interactions with walls or other structures. We examine here a microtubule growth model where the increase in size of the plus-end is perturbed by collisions with…

Soft Condensed Matter · Physics 2010-09-29 Vladimir A. Baulin , Carlos M. Marques , Fabrice Thalmann

This manuscript investigates the impact of key dust evolution parameters on dust retention and trapping in protoplanetary discs. Using models with and without pressure bumps, combined with radiative transfer simulations, images of the dust…

Earth and Planetary Astrophysics · Physics 2026-01-07 Paola Pinilla

This paper derives the Fokker-Planck (FP) equation for a particle moving in potential by a randomly modulated dipole. The FP equation describes the anomalous diffusion observed in the companion paper [1] and breaks the conservation of the…

Mathematical Physics · Physics 2022-05-03 S. Katagiri , Y. Matsuo , Y. Matsuoka , A. Sugamoto

We discuss the failure dynamics of the Fiber Bundle Model, especially in the equal-load-sharing scheme. We also highlight the "Critical" aspects of their dynamics in comparison with those in standard thermodynamic systems undergoing phase…

Statistical Mechanics · Physics 2018-12-26 Srutarshi Pradhan , Bikas K. Chakrabarti

The mitotic spindle lies at the heart of the spatio-temporal control over cellular components during cell division. The spindle consists of microtubules, which are not only crosslinked by motor proteins but also by passive binding proteins.…

Biological Physics · Physics 2020-08-19 Harmen Wierenga , Pieter Rein ten Wolde

Stellar flybys are a common dynamical process in young stellar clusters and can significantly reshape protoplanetary discs. However, their impact on dust dynamics remains poorly understood, particularly in the weakly coupled regime…

Earth and Planetary Astrophysics · Physics 2026-01-27 Wei-Shan Su , Jeremy L. Smallwood , Min-Kai Lin , Chao-Chin Yang , Nicolás Cuello

The transfer of mechanical signals through cells is a complex phenomenon. To uncover a new mechanotransduction pathway, we study the frequency-dependent transport of mechanical stimuli by single microtubules and small networks in a…

Biological Physics · Physics 2017-05-03 M. D. Koch , N. Schneider , P. Nick , A. Rohrbach

In the experiment that first demonstrated gyrotactic behaviour of bottom-heavy swimming microalgae (e.g. Chlamydomonas), Kessler (Nature, vol. 313, 1985, pp. 218-220) showed that a beam-like structure, often referred to as a gyrotactic…

Fluid Dynamics · Physics 2020-10-28 Lloyd Fung , Rachel N. Bearon , Yongyun Hwang

In this study, we employ analytical and numerical techniques to examine a phase transition model with moving boundaries. The model displays two relevant spatial scales pointing out to a macroscopic phase and a microscopic phase, interacting…

Numerical Analysis · Mathematics 2024-08-01 Michael Eden , Tom Freudenberg , Adrian Muntean

Metastases are the primary cause of death in cancer patients. Small animal models are helping in dissecting some of key features in the metastatic cascade. Yet, tools for systematically analyze the contribution of blood flow, vascular…

Cell Behavior · Quantitative Biology 2019-07-31 Hilaria Mollica , Roberto Palomba , Rosita Primavera , Paolo Decuzzi

Atherosclerotic plaque growth is characterised by chronic inflammation that promotes accumulation of cellular debris and extracellular fat in the inner artery wall. This material is highly thrombogenic, and plaque rupture can lead to the…

Cell Behavior · Quantitative Biology 2018-05-21 Michael G. Watson , Helen M. Byrne , Charlie Macaskill , Mary R. Myerscough

We study the stochastic dynamics of growth and shrinkage of single actin filaments taking into account insertion, removal, and ATP hydrolysis of subunits either according to the vectorial mechanism or to the random mechanism. In a previous…

Biomolecules · Quantitative Biology 2015-05-13 Padinhateeri Ranjith , Kirone Mallick , Jean-Francois Joanny , David Lacoste

We investigate the survival probability of a particle diffusing between two parallel reflecting planes toward a periodic array of absorbing pillars. We approximate the periodic cell of this system by a cylindrical tube containing a single…

Statistical Mechanics · Physics 2023-10-03 Denis S. Grebenkov , Alexei T. Skvortsov

We study metastability and nucleation for the Blume-Capel model: a ferromagnetic nearest neighbour two-dimensional lattice system with spin variables taking values in -1,0,+1. We consider large but finite volume, small fixed magnetic field…

High Energy Physics - Theory · Physics 2009-10-28 Emilio N. M. Cirillo , Enzo Olivieri

The possible paralelism existing between phase transitions and fracture in disordered materials, is discussed using the well-known Fiber Bundle Models and a probabilistic approach suited to smooth fluctuations near the critical point. Two…

Statistical Mechanics · Physics 2009-11-07 Y. Moreno , J. B. Gomez , A. F. Pacheco

Self-organization of kinesin-driven, microtubule-based 3D active fluids relies on the collective dynamics of single microtubules. However, the connection between macroscopic fluid flows and microscopic motion of microtubules remains…

Soft Condensed Matter · Physics 2019-04-29 Teagan E. Bate , Edward J. Jarvis , Megan E. Varney , Kun-Ta Wu

Bundle-of-tubes model was previously used to understand the flow behaviour in a porous medium. The interacting nature of the pores within a porous medium can be well depicted by an interacting capillary model. However, the arrangement of…

Fluid Dynamics · Physics 2020-12-22 Shabina Ashraf , Yves Méheust , Jyoti Phirani

We review here briefly the nature of precursors of global failures in three different kinds of many-body dynamical systems. First, we consider the lattice models of self-organised criticality in sandpiles and investigate numerically the…

Statistical Mechanics · Physics 2007-05-23 Srutarshi Pradhan , Bikas K. Chakrabarti

A microtubule (MT) is a hollow tube of approximately 25 nm diameter. The two ends of the tube are dissimilar and are designated as `plus' and `minus' ends. Motivated by the collective push and pull exerted by a bundle of MTs during…

Subcellular Processes · Quantitative Biology 2015-01-12 Dipanwita Ghanti , Debashish Chowdhury
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