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The fundamental task of group testing is to recover a small distinguished subset of items from a large population while efficiently reducing the total number of tests (measurements). The key contribution of this paper is in adopting a new…

Information Theory · Computer Science 2015-03-13 George Kamal Atia , Venkatesh Saligrama

In one-stage or non-adaptive group testing, instead of testing every sample unit individually, they are split, bundled in pools, and simultaneously tested. The results are then decoded to infer the states of the individual items. This…

Applications · Statistics 2020-12-04 Christoph Schumacher , Matthias Täufer

Identification of defective members of large populations has been widely studied in the statistics community under the name of group testing. It involves grouping subsets of items into different pools and detecting defective members based…

Information Theory · Computer Science 2016-11-18 Mahdi Cheraghchi , Ali Hormati , Amin Karbasi , Martin Vetterli

We study the problem of estimating the number of defective items $d$ within a pile of $n$ elements up to a multiplicative factor of $\Delta>1$, using deterministic group testing algorithms. We bring lower and upper bounds on the number of…

Information Theory · Computer Science 2020-09-08 Nader H. Bshouty , Catherine A. Haddad-Zaknoon

In the problem of classical group testing one aims to identify a small subset (of size $d$) diseased individuals/defective items in a large population (of size $n$). This process is based on a minimal number of suitably-designed group tests…

Information Theory · Computer Science 2022-09-26 Xiwei Cheng , Sidharth Jaggi , Qiaoqiao Zhou

Accurate detection of infected individuals is one of the critical steps in stopping any pandemic. When the underlying infection rate of the disease is low, testing people in groups, instead of testing each individual in the population, can…

Group testing is a well-known search problem that consists in detecting of $s$ defective members of a set of $t$ samples by carrying out tests on properly chosen subsets of samples. In classical group testing the goal is to find all…

Information Theory · Computer Science 2020-05-19 Ilya Vorobyev

Recent advances in noiseless non-adaptive group testing have led to a precise asymptotic characterization of the number of tests required for high-probability recovery in the sublinear regime $k = n^{\theta}$ (with $\theta \in (0,1)$), with…

Data Structures and Algorithms · Computer Science 2021-12-24 Oliver Gebhard , Max Hahn-Klimroth , Olaf Parczyk , Manuel Penschuck , Maurice Rolvien , Jonathan Scarlett , Nelvin Tan

We formulate and analyze a stochastic threshold group testing problem motivated by biological applications. Here a set of $n$ items contains a subset of $d \ll n$ defective items. Subsets (pools) of the $n$ items are tested -- the test…

Information Theory · Computer Science 2013-04-25 Chun Lam Chan , Sheng Cai , Mayank Bakshi , Sidharth Jaggi , Venkatesh Saligrama

When the infection prevalence of a disease is low, Dorfman showed 80 years ago that testing groups of people can prove more efficient than testing people individually. Our goal in this paper is to propose new group testing algorithms that…

Methodology · Statistics 2020-07-23 Marco Cuturi , Olivier Teboul , Quentin Berthet , Arnaud Doucet , Jean-Philippe Vert

Non-adaptive group testing involves grouping arbitrary subsets of $n$ items into different pools. Each pool is then tested and defective items are identified. A fundamental question involves minimizing the number of pools required to…

Discrete Mathematics · Computer Science 2011-07-26 Mahdi Cheraghchi , Amin Karbasi , Soheil Mohajer , Venkatesh Saligrama

The basic goal in combinatorial group testing is to identify a set of up to $d$ defective items within a large population of size $n \gg d$ using a pooling strategy. Namely, the items can be grouped together in pools, and a single…

Discrete Mathematics · Computer Science 2013-01-21 Mahdi Cheraghchi

The group testing problem is concerned with identifying a small set of infected individuals in a large population. At our disposal is a testing procedure that allows us to test several individuals together. In an idealized setting, a test…

Information Theory · Computer Science 2023-09-19 Oliver Gebhard , Oliver Johnson , Philipp Loick , Maurice Rolvien

Group testing is the combinatorial problem of identifying the defective items in a population by grouping items into test pools. Recently, nonadaptive group testing - where all the test pools must be decided on at the start - has been…

Information Theory · Computer Science 2013-01-31 Matthew Aldridge

\emph{Group Testing} (GT) addresses the problem of identifying a small subset of defective items from a large population, by grouping items into as few test pools as possible. In \emph{Adaptive GT} (AGT), outcomes of previous tests can…

Information Theory · Computer Science 2020-08-17 Alejandro Cohen , Asaf Cohen , Omer Gurewitz

The original problem of group testing consists in the identification of defective items in a collection, by applying tests on groups of items that detect the presence of at least one defective item in the group. The aim is then to identify…

Applications · Statistics 2021-06-10 Emilien Joly , Bastien Mallein

The task of non-adaptive group testing is to identify up to $d$ defective items from $N$ items, where a test is positive if it contains at least one defective item, and negative otherwise. If there are $t$ tests, they can be represented as…

Information Theory · Computer Science 2020-01-07 Thach V. Bui , Minoru Kuribayashi , Tetsuya Kojima , Roghayyeh Haghvirdinezhad , Isao Echizen

Group testing with inhibitors (GTI) introduced by Farach at al. is studied in this paper. There are three types of items, $d$ defectives, $r$ inhibitors and $n-d-r$ normal items in a population of $n$ items. The presence of any inhibitor in…

Information Theory · Computer Science 2014-12-16 Abhinav Ganesan , Javad Ebrahimi , Sidharth Jaggi , Venkatesh Saligrama

In the classical non-adaptive group testing setup, pools of items are tested together, and the main goal of a recovery algorithm is to identify the "complete defective set" given the outcomes of different group tests. In contrast, the main…

Information Theory · Computer Science 2016-03-01 Abhay Sharma , Chandra R. Murthy

We consider a new group testing model wherein each item is a binary random variable defined by an a priori probability of being defective. We assume that each probability is small and that items are independent, but not necessarily…

Information Theory · Computer Science 2018-07-24 Tongxin Li , Chun Lam Chan , Wenhao Huang , Tarik Kaced , Sidharth Jaggi