Improved Constructions for Non-adaptive Threshold Group Testing
Abstract
The basic goal in combinatorial group testing is to identify a set of up to defective items within a large population of size using a pooling strategy. Namely, the items can be grouped together in pools, and a single measurement would reveal whether there are one or more defectives in the pool. The threshold model is a generalization of this idea where a measurement returns positive if the number of defectives in the pool reaches a fixed threshold , negative if this number is no more than a fixed lower threshold , and may behave arbitrarily otherwise. We study non-adaptive threshold group testing (in a possibly noisy setting) and show that, for this problem, measurements (where and is any fixed constant) suffice to identify the defectives, and also present almost matching lower bounds. This significantly improves the previously known (non-constructive) upper bound . Moreover, we obtain a framework for explicit construction of measurement schemes using lossless condensers. The number of measurements resulting from this scheme is ideally bounded by . Using state-of-the-art constructions of lossless condensers, however, we obtain explicit testing schemes with and measurements, for arbitrary constant .
Keywords
Cite
@article{arxiv.1002.2244,
title = {Improved Constructions for Non-adaptive Threshold Group Testing},
author = {Mahdi Cheraghchi},
journal= {arXiv preprint arXiv:1002.2244},
year = {2013}
}
Comments
Revised draft of the full version. Contains various edits and a new lower bounds section. Preliminary version appeared in Proceedings of the 37th International Colloquium on Automata, Languages and Programming (ICALP), 2010