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Improved Constructions for Non-adaptive Threshold Group Testing

Discrete Mathematics 2013-01-21 v3 Information Theory math.IT

Abstract

The basic goal in combinatorial group testing is to identify a set of up to dd defective items within a large population of size ndn \gg d using a pooling strategy. Namely, the items can be grouped together in pools, and a single measurement would reveal whether there are one or more defectives in the pool. The threshold model is a generalization of this idea where a measurement returns positive if the number of defectives in the pool reaches a fixed threshold u>0u > 0, negative if this number is no more than a fixed lower threshold <u\ell < u, and may behave arbitrarily otherwise. We study non-adaptive threshold group testing (in a possibly noisy setting) and show that, for this problem, O(dg+2(logd)log(n/d))O(d^{g+2} (\log d) \log(n/d)) measurements (where g:=u1g := u-\ell-1 and uu is any fixed constant) suffice to identify the defectives, and also present almost matching lower bounds. This significantly improves the previously known (non-constructive) upper bound O(du+1log(n/d))O(d^{u+1} \log(n/d)). Moreover, we obtain a framework for explicit construction of measurement schemes using lossless condensers. The number of measurements resulting from this scheme is ideally bounded by O(dg+3(logd)logn)O(d^{g+3} (\log d) \log n). Using state-of-the-art constructions of lossless condensers, however, we obtain explicit testing schemes with O(dg+3(logd)qpoly(logn))O(d^{g+3} (\log d) qpoly(\log n)) and O(dg+3+βpoly(logn))O(d^{g+3+\beta} poly(\log n)) measurements, for arbitrary constant β>0\beta > 0.

Keywords

Cite

@article{arxiv.1002.2244,
  title  = {Improved Constructions for Non-adaptive Threshold Group Testing},
  author = {Mahdi Cheraghchi},
  journal= {arXiv preprint arXiv:1002.2244},
  year   = {2013}
}

Comments

Revised draft of the full version. Contains various edits and a new lower bounds section. Preliminary version appeared in Proceedings of the 37th International Colloquium on Automata, Languages and Programming (ICALP), 2010

R2 v1 2026-06-21T14:45:50.118Z