Related papers: Longest common subsequences in binary sequences

Let $F_n$ and $L_n$ be the Fibonacci and Lucas numbers, respectively. Four corresponding zeta functions in $s$ are defined by \[\zeta_F(s) \,:=\, \sum_{n=1}^{\infty} \frac{1}{F_n^s}\,,\quad \zeta_F^*(s) \,:=\,\sum_{n=1}^{\infty}…

Given a pair of strings, the problems of computing their Longest Common Subsequence and Edit Distance have been extensively studied for decades. For exact algorithms, LCS and Edit Distance (with character insertions and deletions) are…

Let $A_n=(a_0,a_1,\dots,a_{n-1})$ be drawn uniformly at random from $\{-1,+1\}^n$ and define \[ M(A_n)=\max_{0<u<n}\,\Bigg|\sum_{j=0}^{n-u-1}a_ja_{j+u}\Bigg|\quad\text{for $n>1$}. \] It is proved that $M(A_n)/\sqrt{n\log n}$ converges in…

In this work we consider the problem of computing the $(\min, +)$-convolution of two sequences $a$ and $b$ of lengths $n$ and $m$, respectively, where $n \geq m$. We assume that $a$ is arbitrary, but $b_i = f(i)$, where $f(x) \colon [0,m)…

A classical bijection relates certain Kostka numbers, the Catalan numbers, and permutations of length $n$ with longest increasing subsequence (LIS) of length at most $2.$ We generalize this bijection and find Kostka numbers which count the…

For an integer $k\geq 2$, let $(L_{n}^{(k)})_{n}$ be the $k-$generalized Lucas sequence which starts with $0,\ldots,0,2,1$ ($k$ terms) and each term afterwards is the sum of the $k$ preceding terms. In this paper, we find all the integers…

Finding analytically the statistics of the longest common subsequence (LCS) of a pair of random sequences drawn from c alphabets is a challenging problem in computational evolutionary biology. We present exact asymptotic results for the…

It is well-known that any sequence of at least N integers contains a subsequence whose sum is 0 (mod N). However, there can be very few subsequences with this property (e.g. if the initial sequence is just N 1's, then there is only one…

Let $(u_n)_{n \geq 0}$ be a non-degenerate Lucas sequence, given by the relation $u_n=a_1 u_{n-1}+a_2 u_{n-2}$. Let $\ell_u(m)=lcm(m, z_u(m))$, for $(m,a_2)=1$, where $z_u(m)$ is the rank of appearance of $m$ in $u_n$. We prove that…

Let $P_{n,k}$ be the number of permutations $\pi$ on [n]={1, 2,..., n} such that the length of the longest increasing subsequences of $\pi$ equals k, and let $M_{2n, k}$ be the number of matchings on [2n] with crossing number k. Define…

Let $L_{c,n}$ denote the size of the longest cycle in $G(n,{c}/{n})$, $c>1$ constant. We show that there exists a continuous function $f(c)$ such that $ L_{c,n}/n \to f(c)$ a.s. for $c\geq 20$, thus extending a result of the author and…

Let $G$ be a group and $N$ its normal subgroup. On the mixed commutator subgroup $[G,N]$, the mixed stable commutator length $\mathrm{scl}_{G,N}$ and the restriction of the ordinary stable commutator length $\mathrm{scl}_{G}$ are defined.…

For a set of mulitple sequences, their patterns,Longest Common Subsequences (LCS) and Shortest Common Supersequences (SCS) represent different aspects of these sequences profile, and they can all be used for biological sequence comparisons…

We determine the average number of distinct subsequences in a random binary string, and derive an estimate for the average number of distinct subsequences of a particular length.

Given $m$ documents of total length $n$, we consider the problem of finding a longest string common to at least $d \geq 2$ of the documents. This problem is known as the \emph{longest common substring (LCS) problem} and has a classic $O(n)$…

Longest common extension queries (often called longest common prefix queries) constitute a fundamental building block in multiple string algorithms, for example computing runs and approximate pattern matching. We show that a sequence of $q$…

In this paper, we consider a generalized longest common subsequence problem, in which a constraining sequence of length $s$ must be included as a substring and the other constraining sequence of length $t$ must be excluded as a subsequence…

In this paper we present the theory of lacunary trigonometric sums and lacunary sums of dilated functions, from the origins of the subject up to recent developments. We describe the connections with mathematical topics such as…

Let $(L_n)_{n \geq 1}$ be the sequence of Lucas numbers, defined recursively by $L_1 := 1$, $L_2 := 3$, and $L_{n + 2} := L_{n + 1} + L_n$, for every integer $n \geq 1$. We determine the asymptotic behavior of $\log \operatorname{lcm} (L_1…

Let $(a_n), (b_n)$ be linear recursive sequences of integers with characteristic polynomials $A(X),B(X)\in \mathbb{Z}[X]$ respectively. Assume that $A(X)$ has a dominating and simple real root $\alpha$, while $B(X)$ has a pair of conjugate…