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The immune response to a pathogen has two basic features. The first is the expansion of a few pathogen-specific cells to form a population large enough to control the pathogen. The second is the process of differentiation of cells from an…

Populations and Evolution · Quantitative Biology 2014-02-04 Sean P Stromberg , Rustom Antia , Ilya Nemenman

Multi-agent approach has become popular in computer science and technology. However, the conventional models of multi-agent and multicomponent systems implicitly or explicitly assume existence of absolute time or even do not include time in…

Multiagent Systems · Computer Science 2017-11-23 Mark Burgin

Artificial immune systems primarily mimic the adaptive nature of biological immune functions. Their ability to adapt to varying pathogens makes such systems a suitable choice for various robotic applications. Generally, AIS-based robotic…

Robotics · Computer Science 2012-02-21 Ali Raza , Benito R. Fernandez

Agent-Based Models are a powerful class of computational models widely used to simulate complex phenomena in many different application areas. However, one of the most critical aspects, poorly investigated in the literature, regards an…

Quantitative Methods · Quantitative Biology 2021-03-02 Cristina Curreli , Francesco Pappalardo , Giulia Russo , Marzio Pennisi , Dimitrios Kiagias , Miguel Juarez , Marco Viceconti , .

An interesting concept that has been underexplored in the context of time-dependent simulations is the correlation of total magnetization, $C(t)$%. One of its main advantages over directly studying magnetization is that we do not need to…

Statistical Mechanics · Physics 2023-10-09 Roberto da Silva , Tânia Tomé , Mário José de Oliveira

The prediction of the behavior of the disease, the level of affectation in a population and the ways to control it are the most important aspects studied by epidemiology using tools such as historical data and mathematical models. So, our…

Dynamical Systems · Mathematics 2022-04-04 Jorge Andrés Ibáñez Huertas , Carlos Isaac Zainea Maya

Aging refers to the evolution of system properties with waiting time $t_w$. It is a key feature of glassy dynamics. Recent experiments have demonstrated aging in biological systems that are inherently active with a magnitude of…

Soft Condensed Matter · Physics 2026-04-10 Soumitra Kolya , Nir S. Gov , Saroj Kumar Nandi

The dynamics of strongly disordered systems becomes extremely slow or glassy at low temperatures, which results in a characteristic aging scenario. This means that the outcome of measurements strongly depends on the history of the system…

Condensed Matter · Physics 2015-06-25 Heiko Rieger

Risk management resulting from the actions and states of the different elements making up a operating room is a major concern during a surgical procedure. Agent-based simulation shows an interest through its interaction concepts,…

Artificial Intelligence · Computer Science 2020-07-23 Bruno Perez , Julien Henriet , Christophe Lang , Laurent Philippe

In order to grasp the features arising from cellular discreteness and individuality, in large parts of cell tissue modelling agent-based models are favoured. The subclass of off-lattice models allows for a physical motivation of the…

Biological Physics · Physics 2007-06-21 Gernot Schaller , Michael Meyer-Hermann

The primary objective of this paper is to highlight the need for and benefits of studying the steady state and dynamic response of power systems using three phase integrated transmission and distribution (T&D) system models (hereafter…

Systems and Control · Computer Science 2016-11-23 Himanshu Jain , Kaveh Rahimi , Ahmad Tbaileh , Robert P. Broadwater , Akshay Kumar Jain , Murat Dilek

Biological systems, unlike physical or chemical systems, are characterized by the very inhomogeneous distribution of their components. The immune system, in particular, is notable for self-organizing its structure. Classically, the dynamics…

Statistical Mechanics · Physics 2007-05-23 Yoram Louzoun , Sorin Solomon , Henri Atlan , Irun R. Cohen

Skin contraction is an important biophysical process that takes place during and after the recovery of deep tissue injury. This process is mainly caused by fibroblasts (skin cells) and myofibroblasts (differentiated fibroblasts) that exert…

Numerical Analysis · Mathematics 2021-05-20 Q. Peng , F. J. Vermolen

Artificial intelligence (AI) is accelerating progress in modeling T and B cell receptors by enabling predictive and generative frameworks grounded in sequence data and immune context. This chapter surveys recent advances in the use of…

Biomolecules · Quantitative Biology 2026-01-30 Linhui Xie , Aurelien Pelissier , Yanjun Shao , Maria Rodriguez Martinez

Agent-based modeling plays an essential role in gaining insights into biology, sociology, economics, and other fields. However, many existing agent-based simulation platforms are not suitable for large-scale studies due to the low…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-04-25 Lukas Breitwieser , Ahmad Hesam , Fons Rademakers , Juan Gómez Luna , Onur Mutlu

Mathematical modeling of biological systems is crucial to effectively and efficiently developing treatments for medical conditions that plague humanity. Often, systems of ordinary differential equations are a traditional tool used to…

Classical Analysis and ODEs · Mathematics 2015-09-01 Eric Jones , Peter Roemer , Mrinal Raghupathi , Stephen Pankavich

We introduce a model for describing the dynamics of large numbers of interacting cells. The fundamental dynamical variables in the model are sub-cellular elements, which interact with each other through phenomenological intra- and…

Quantitative Methods · Quantitative Biology 2007-05-23 T. J. Newman

Changes of mind can become less likely the longer an agent has adopted a given opinion state. This resilience or inertia to change has been called ``aging''. We perform a comparative study of the effects of aging on the critical behavior of…

Physics and Society · Physics 2024-08-01 Jaume Llabres , Sara Oliver-Bonafoux , Celia Anteneodo , Raul Toral

Agent-based models have proven to be useful tools in supporting decision-making processes in different application domains. The advent of modern computers and supercomputers has enabled these bottom-up approaches to realistically model…

In our research we investigate the output accuracy of discrete event simulation models and agent based simulation models when studying human centric complex systems. In this paper we focus on human reactive behaviour as it is possible in…

Artificial Intelligence · Computer Science 2010-07-05 Mazlina Abdul Majid , Uwe Aickelin , Peer-Olaf Siebers
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