English
Related papers

Related papers: Dynamics in the smectic phase of stiff viral rods

200 papers

We present the first experimental measurements of the isotropic and nematic phases of mixtures of thin, charged semiflexible fd virus, and thick, fd-PEG created by covalently grafting poly-(ethylene glycol) to the the surface of fd, rods.…

Soft Condensed Matter · Physics 2009-11-10 Kirstin Purdy , Szabolcs Varga , Amparo Galindo , George Jackson , Seth Fraden

Using computer simulations, we studied the diffusion and structural relaxation in equilibrium smectic liquid crystal bulk phases of parallel hard spherocylinders. These systems exhibit a non-Gaussian layer-to-layer diffusion due to the…

Soft Condensed Matter · Physics 2010-02-17 Rik Matena , Marjolein Dijkstra , Alessandro Patti

We apply density functional theory to study the influence of polydispersity on the stability of columnar, smectic and solid ordering in the solutions of rodlike macromolecules. For sufficiently large length polydispersity (standard…

Condensed Matter · Physics 2009-10-28 Anne Bohle , Robert Hołyst , Thomas Vilgis

We investigate the statistical behavior of a system comprising fore-aft symmetric rods confined between two vertically vibrating plates using numerical simulations closely resembling the experimental setup studied by Narayan et al., Science…

Soft Condensed Matter · Physics 2024-08-20 Abhishek Sharma , Harsh Soni

The orientational distribution function of the nematic phase of the semi-flexible rod-like virus fd is measured by x-ray diffraction as a function of concentration and ionic strength. The angular distribution of the scattered intensity from…

Soft Condensed Matter · Physics 2013-05-29 K. R. Purdy , Z. Dogic , S. Fraden , A. Ruehm , L. Lurio , S. G. J. Mochrie

Complex fluids containing low concentrations of slender colloidal rods can display a high viscosity, while little flow is needed to thin the fluid. This feature makes slender rods essential constituents in industrial applications and…

We report on a comprehensive computer simulation study of the liquid-crystal phase behaviour of purely repulsive, semi-flexible rod-like particles. For the four aspect ratios we consider, the particles form five distinct phases depending on…

Soft Condensed Matter · Physics 2018-01-17 Bart de Braaf , Mariana Oshima Menegon , Stefan Paquay , Paul van der Schoot

The phase behavior of the system of parallel rigid triblock copolymers is examined using the second-virial density functional theory. The triblock particle consists of two identical infinitely thin hard rods of finite lengths on the…

Soft Condensed Matter · Physics 2007-10-15 Szabolcs Varga , Seth Fraden

The theory of nematic-smectic phase transition in the system of uniform semi-flexible chains with hard-core repulsion is presented. Both the general density-functional formalism the tube-model calculation show that the flexibility of the…

Soft Condensed Matter · Physics 2009-10-31 Alexei V. Tkachenko

We study the stability of inhomogeneous liquid crystalline states in systems of monodisperse, stiff, charged rods. By means of a bifurcation analysis applied to the Onsager free energy for charged rods in strongly nematic states, we…

Soft Condensed Matter · Physics 2012-07-17 H. H. Wensink

Using simulations of hard rods in smectic-A states, we find non-gaussian diffusion and heterogeneous dynamics due to the equilibrium periodic smectic density profiles, which give rise to permanent barriers for layer-to-layer diffusion. This…

Soft Condensed Matter · Physics 2009-12-15 A. Patti , D. El Masri , R. van Roij , M. Dijkstra

The dynamics of a stiff filament (made by connecting beads) embedded in size-polydisperse hard sphere fluid is investigated by means of molecular dynamics simulations with focus on how the degree of size-polydispersity, characterized by…

Soft Condensed Matter · Physics 2025-03-06 Thokchom Premkumar Meitei , Lenin S. Shagolsem

Dispersions of rodlike colloidal particles exhibit a plethora of liquid crystalline states, including nematic, smectic A, smectic B, and columnar phases. This phase behavior can be explained by presuming the predominance of hard-core volume…

Soft Condensed Matter · Physics 2019-04-01 Andrii Repula , Mariana Oshima Menegon , Cheng Wu , Paul van der Schoot , Eric Grelet

We report on single-particle dynamics of strongly interacting filamentous fd virus particles in the liquid-crystalline columnar state in aqueous solution. From fluorescence microscopy we find that rare, discrete events take place, in which…

Soft Condensed Matter · Physics 2013-06-25 Saber Naderi , Emilie Pouget , Pierre Ballesta , Paul van der Schoot , M. Paul Lettinga , Eric Grelet

Transport of rodlike particles in confinement environments of macromolecular networks plays crucial roles in many important biological processes and technological applications. The relevant understanding has been limited to thin rods with…

We investigate the anomalous dynamics in smectic phases of short host rods where, counter-intuitively, long guest rod-shaped particles diffusive faster than the short host ones, due to their precise size mismatch. In addition to the…

Soft Condensed Matter · Physics 2021-06-16 M. Paul Lettinga , Laura Alvarez , Olivera Korculanin , Eric Grelet

In the first part of this paper, an approximate theory is developed for the leading order concentration dependence of the sedimentation coefficient for rod-like colloids/polymers/macromolecules. To first order in volume fraction $\phi$ of…

Soft Condensed Matter · Physics 2009-10-31 Z. Dogic , A. P. Philipse , S. Fraden , J. K. G. Dhont

We directly visualize single polymers with persistence lengths ranging from $\ell_p=0.05$ to 16 $\mu$m, dissolved in the nematic phase of rod-like {\it fd} virus. Polymers with sufficiently large persistence length undergo a coil-rod…

We investigate the dynamic behavior of long guest rod-like particles immersed in liquid crystalline phases formed by shorter host rods, tracking both guest and host particles by fluorescence microscopy. Counter-intuitively, we evidence that…

Soft Condensed Matter · Physics 2017-05-03 Laura Alvarez , M. Paul Lettinga , Eric Grelet

Non-motile elongated bacteria confined in two-dimensional open micro-channels can exhibit collective motion and form dense monolayers with nematic order if the cells proliferate, i.e., grow and divide. Using soft molecular dynamics…

Soft Condensed Matter · Physics 2013-07-25 Sirio Orozco-Fuentes , Denis Boyer