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Related papers: mendelFix: a Perl script for checking Mendelian er…

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CPUs are becoming more complex with every generation, at both the logical and the physical levels. This potentially leads to more logic bugs and electrical defects in CPUs being overlooked during testing, which causes data corruption or…

Hardware Architecture · Computer Science 2021-10-25 Kostya Serebryany , Maxim Lifantsev , Konstantin Shtoyk , Doug Kwan , Peter Hochschild

We propose a statistical method to test whether two phylogenetic trees with given alignments are significantly incongruent. Our method compares the two distributions of phylogenetic trees given by the input alignments, instead of comparing…

Populations and Evolution · Quantitative Biology 2010-04-14 Elissaveta Arnaoudova , David Haws , Peter Huggins , Jerzy W. Jaromczyk , Neil Moore , Chris Schardl , Ruriko Yoshida

Kernel traces are sequences of low-level events comprising a name and multiple arguments, including a timestamp, a process id, and a return value, depending on the event. Their analysis helps uncover intrusions, identify bugs, and find…

Machine Learning · Computer Science 2021-03-15 Quentin Fournier , Daniel Aloise , Seyed Vahid Azhari , François Tetreault

Concurrent separation logic with fractional permissions (CSLPerm) provides a promising reasoning system to verify most complex sequential and concurrent fine-grained programs. The logic with strong and weak separating conjunctions offers a…

Logic in Computer Science · Computer Science 2025-10-07 Quang Loc Le

Circuit link prediction, which identifies missing component connections from incomplete netlists, is crucial in analog circuit design automation. However, existing methods face three main challenges: 1) Insufficient use of topological…

Hardware Architecture · Computer Science 2025-11-19 Guanyuan Pan , Tiansheng Zhou , Jianxiang Zhao , Zhi Li , Yugui Lin , Bingtao Ma , Yaqi Wang , Pietro Liò , Shuai Wang

This paper describes SEDfit, the earliest --- but continually upgraded --- software package for spectral energy distribution fitting (SED fitting) of high-redshift photometric data, and the only one to properly treat non-detections. The…

Instrumentation and Methods for Astrophysics · Physics 2015-06-11 Marcin Sawicki

More music foundation models are recently being released, promising a general, mostly task independent encoding of musical information. Common ways of adapting music foundation models to downstream tasks are probing and fine-tuning. These…

Sound · Computer Science 2024-12-02 Yiwei Ding , Alexander Lerch

Software development often involves systematic edits, similar but nonidentical changes to many code locations, that are error-prone and laborious for developers. Mining and learning such systematic edit patterns (SEPs) from past code…

Software Engineering · Computer Science 2021-07-12 Kunihiro Noda , Haruki Yokoyama , Shinji Kikuchi

Software debugging has been shown to utilize upwards of half of developers' time. Yet, machine programming (MP), the field concerned with the automation of software (and hardware) development, has recently made strides in both research and…

Software Engineering · Computer Science 2021-05-18 Niranjan Hasabnis , Justin Gottschlich

The simple greedy algorithm to find a maximal independent set of a graph can be viewed as a sequential update of a Boolean network, where the update function at each vertex is the conjunction of all the negated variables in its…

Discrete Mathematics · Computer Science 2023-07-12 Maximilien Gadouleau , David C. Kutner

LDPC codes are used in many applications, however, their error correcting capabilities are limited by the presence of stopping sets and trapping sets. Trapping sets and stopping sets occur when specific low-wiehgt error patterns cause a…

Information Theory · Computer Science 2017-05-18 Aiden Price , Joanne Hall

Programming is a core skill in computer science and software engineering (SE), yet identifying and resolving code errors remains challenging for both novice and experienced developers. While Large Language Models (LLMs) have shown…

Software Engineering · Computer Science 2026-03-27 Md Faizul Ibne Amin , Yutaka Watanobe , Md. Mostafizer Rahman , Daniel M. Muepu , Md. Shahajada Mia

With continuous progression of Moore's Law, integrated circuit (IC) device complexity is also increasing. Scanning Electron Microscope (SEM) image based extensive defect inspection and accurate metrology extraction are two main challenges…

Computer Vision and Pattern Recognition · Computer Science 2023-08-17 Vic De Ridder , Bappaditya Dey , Sandip Halder , Bartel Van Waeyenberge

Thousands of vulnerabilities are reported on a monthly basis to security repositories, such as the National Vulnerability Database. Among these vulnerabilities, software misconfiguration is one of the top 10 security risks for web…

Cryptography and Security · Computer Science 2022-10-03 Carlos Diego Nascimento Damasceno , Daniel Strüber

The detection of triadic subgraph motifs is a common methodology in complex-networks research. The procedure usually applied in order to detect motifs evaluates whether a certain subgraph pattern is overrepresented in a network as a whole.…

Social and Information Networks · Computer Science 2015-09-14 Marco Winkler

This paper introduces three key initiatives in the pursuit of a hybrid decoding framework characterized by superior decoding performance, high throughput, low complexity, and independence from channel noise variance. Firstly, adopting a…

Information Theory · Computer Science 2024-02-06 Guangwen Li , Xiao Yu

Addressing the reproducibility crisis in artificial intelligence through the validation of reported experimental results is a challenging task. It necessitates either the reimplementation of techniques or a meticulous assessment of papers…

Machine Learning · Computer Science 2023-11-14 György Kovács , Attila Fazekas

Many cloud services provide REST API accessible to client applications. However, developers often identify specification violations only during testing, as error messages typically lack the detail necessary for effective diagnosis.…

Software Engineering · Computer Science 2025-10-30 Katsuki Yamagishi , Norihiro Yoshida , Erina Makihara , Katsuro Inoue

Recently-developed genotype imputation methods are a powerful tool for detecting untyped genetic variants that affect disease susceptibility in genetic association studies. However, existing imputation methods require individual-level…

Applications · Statistics 2010-11-15 Xiaoquan Wen , Matthew Stephens

The detection of manufacturing errors is crucial in fabrication processes to ensure product quality and safety standards. Since many defects occur very rarely and their characteristics are mostly unknown a priori, their detection is still…

Computer Vision and Pattern Recognition · Computer Science 2020-08-31 Marco Rudolph , Bastian Wandt , Bodo Rosenhahn