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Plasmodium of true slime mold, Physarum polycephalum, is an amoeboid organism, which spreads with developing tubular network structure and crawls on two-dimensional plane with oscillating the cell thickness. The plasmodium transforms its…

Adaptation and Self-Organizing Systems · Physics 2009-04-10 Yuki Kagawa , Atsuko Takamatsu

Effectively determining malaria parasitemia is a critical aspect in assisting clinicians to accurately determine the severity of the disease and provide quality treatment. Microscopy applied to thick smear blood smears is the de facto…

Image and Video Processing · Electrical Eng. & Systems 2020-12-04 Rose Nakasi , Aminah Zawedde , Ernest Mwebaze , Jeremy Francis Tusubira , Gilbert Maiga

Pore-forming toxins (PFT) are cytolytic proteins belonging to the molecular warfare apparatus of living organisms. The assembly of the functional transmembrane pore requires several intermediate steps ranging from a water-soluble monomeric…

Active movement is essential for the survival of microorganisms like bacteria, algae and unicellular parasites. In three dimensions, both swimming and gliding microorganisms often exhibit helical trajectories. One such case are malaria…

Cell Behavior · Quantitative Biology 2025-10-09 Leon Lettermann , Falko Ziebert , Mirko Singer , Friedrich Frischknecht , Ulrich S. Schwarz

Marine bacterium Vibrio alginolyticus uses a single polar flagellum to navigate in an aqueous environment. Similar to Escherichia coli cells, the polar flagellar motor has two states; when the motor is counter-clockwise, the cell swims…

Biological Physics · Physics 2016-02-17 Li Xie , Tuba Altindal , Xiao-Lun Wu

Acinetobacter baumannii is a typically short, almost round, rod-shaped (coccobacillus) Gram-negative bacterium. It can be an opportunistic pathogen in humans, affecting people with compromised immune systems, and it is becoming increasingly…

Biological Physics · Physics 2019-04-09 P. Svarnas , A. Spiliopoulou , P. G. Koutsoukos , Kristaq Gazeli , E. D. Anastassiou

By employing a series of massively parallel ab-initio simulations, we study how optical forces act on biological matter subject to morphological disease. As a representative case study, we here consider the case of Plasmodium Falciparum on…

Optics · Physics 2016-05-17 Juan Sebastian Totero Gongora , Andrea Fratalocchi

While bacterial swimming has been well characterized in uniform liquid environments, only little is known about how bacteria propagate through complex environments, such as gel-like matrices or porous media that are typically encountered in…

Soft Condensed Matter · Physics 2024-08-06 Agniva Datta , Sönke Beier , Veronika Pfeifer , Robert Großmann , Carsten Beta

Background: AQP1 belongs to aquaporins family, water-specific, membrane-channel proteins expressed in diverse tissues. Recent papers showed that during angiogenesis, AQP1 is expressed preferentially by microvessels, favoring angiogenesis…

Cell Behavior · Quantitative Biology 2013-08-29 Elena Monzani , Riccardo Bazzotti , Carla Perego , Caterina A. M. La Porta

Amphipathic peptides are considered promising antibiotics because of their ability to form pores in bacterial membranes. In two companion papers, we analyzed both experimentally and theoretically the mechanisms and consequences of the…

In this paper, a co-infection of malaria and visceral helminthiasis with immune stimulation and impairment is studied. We have assumed that an individual gets malaria infection during invasion by helminths larvae. In absence of immune…

Populations and Evolution · Quantitative Biology 2011-06-06 Betty Nannyonga , J. Y. T. Mugisha , L. S. Luboobi

Cell-penetrating peptides (CPPs) such as HIV's trans-activating transcriptional activator (TAT) and polyarginine rapidly pass through the plasma membranes of mammalian cells by an unknown mechanism called transduction. They may be medically…

Biomolecules · Quantitative Biology 2010-09-21 Kevin Cahill

Quantification of sulfated polysaccharides in urine samples is relevant to pharmacokinetic studies in drug development projects and to the non-invasive diagnosis and therapy monitoring of mucopolysaccharidoses. The Heparin Red Kit is a…

Quantitative Methods · Quantitative Biology 2018-11-26 Ulrich Warttinger , Roland Krämer

The ATP-driven Plasma Membrane Calcium pump or Ca(2+)-ATPase (PMCA) is characterized by a high affinity to calcium and a low transport rate compared to other transmembrane calcium transport proteins. It plays a crucial role for calcium…

Biological Physics · Physics 2014-11-18 Michael Graupner , Frido Erler , Michael Meyer-Hermann

Understanding the risk and protective factors associated with Parkinsons disease (PD) is crucial for improving outcomes for patients, individuals at risk, healthcare providers, and healthcare systems. Studying these factors not only…

Neurons and Cognition · Quantitative Biology 2025-03-12 Iman Beheshti

Predicting if red blood cells (RBC) are infected with the malaria parasite is an important problem in Pathology. Recently, supervised machine learning approaches have been used for this problem, and they have had reasonable success. In…

Computer Vision and Pattern Recognition · Computer Science 2020-10-05 Anik Khan , Kishor Datta Gupta , Deepak Venugopal , Nirman Kumar

Plasmodium falciparum is responsible for the majority of malaria morbidity and mortality each year. Malaria transmission rates vary by location and time of year due to climate and environmental conditions. We show the impact of these…

One of the main causes of death around the globe is malaria. Researchers have sought to develop predictive models for malaria outbreaks based on meteorological data, climate data and the breeding cycle of Plasmodium, the causative agent of…

Other Quantitative Biology · Quantitative Biology 2026-05-20 Mary Opokua Ansong , Asare Yaw Obeng , Samuel King Opoku

Malaria and other parasites, including virus often induce an increase in host lipids which the invaders use to their own advantage. We obtained encouraging results in our investigations on bird malaria with a new approach namely the use of…

Biomolecules · Quantitative Biology 2007-07-19 Ayesha Rahman , Dipankar Seth , Nitai Debnath , C. Ulrichs , I. Mewis , R. L. Brahmachary , A. Goswami

Plasmodium stage of Physarum polycephalum behaves as a distributed dynamical pattern formation mechanism who's foraging and migration is influenced by local stimuli from a wide range of attractants and repellents. Complex protoplasmic tube…

Biological Physics · Physics 2012-04-10 Soichiro Tsuda , Jeff Jones , Andrew Adamatzky , Jonathan Mills
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