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Straight-forward conformation generation models, which generate 3-D structures directly from input molecular graphs, play an important role in various molecular tasks with machine learning, such as 3D-QSAR and virtual screening in drug…

Biomolecules · Quantitative Biology 2022-03-16 Shuwen Yang , Tianyu Wen , Ziyao Li , Guojie Song

We show that a Lie group $G$ admitting a bi-invariant distance must be the product $G=H\times K$ of an abelian group $H$ and a compact group $K$ with discrete center. Moreover, the distance in $G$ must come from the infima of lengths of…

Differential Geometry · Mathematics 2025-12-02 Gabriel Larotonda , Iván Rey

Multiview varieties are mathematical models for the set of image feature correspondences that can be produced by a given camera arrangement. They possess an invariant known as their Euclidean distance (ED) degree, which measures the…

Algebraic Geometry · Mathematics 2026-03-10 Bella Finkel , Jose Israel Rodriguez

Chamfer Distance (CD) is a widely adopted metric in 3D point cloud learning due to its simplicity and efficiency. However, it suffers from a fundamental limitation: it relies solely on Euclidean distances, which often fail to capture the…

Computer Vision and Pattern Recognition · Computer Science 2025-07-01 Pedro Alonso , Tianrui Li , Chongshou Li

In this note we describe a relation between Euler's elasticae and sub-Riemannian geodesics on SE(2). Analyzing the Hamiltonian system of Pontryagin maximum principle we show that these two curves coincide only in the case when they are…

Optimization and Control · Mathematics 2017-04-05 Alexey Mashtakov , Andrei Ardentov , Yuri Sachkov

Natural objects can be subject to various transformations yet still preserve properties that we refer to as invariants. Here, we use definitions of affine invariant arclength for surfaces in R^3 in order to extend the set of existing…

Computer Vision and Pattern Recognition · Computer Science 2010-12-30 Dan Raviv , Alexander M. Bronstein , Michael M. Bronstein , Ron Kimmel , Nir Sochen

We study deformations of the geodesic distances on a domain of R N induced by a function called conformal factor. We show that under a positive reach assumption on the domain (not necessarily a submanifold) and mild assumptions on the…

Statistics Theory · Mathematics 2026-02-19 Jérôme Taupin

We show the equivalence of several characterizations of relative hyperbolicity for metric spaces, and obtain extra information about geodesics in a relatively hyperbolic space. We apply this to characterize hyperbolically embedded subgroups…

Group Theory · Mathematics 2012-10-31 Alessandro Sisto

Metric graphs are meaningful objects for modeling complex structures that arise in many real-world applications, such as road networks, river systems, earthquake faults, blood vessels, and filamentary structures in galaxies. To study metric…

Algebraic Topology · Mathematics 2018-12-14 Ellen Gasparovic , Maria Gommel , Emilie Purvine , Radmila Sazdanovic , Bei Wang , Yusu Wang , Lori Ziegelmeier

We obtain a coarse relationship between geometric intersection numbers of curves and the sum of their subsurface projection distances with explicit quasi-constants. By using this relationship, we give applications in the studies of the…

Geometric Topology · Mathematics 2017-09-12 Yohsuke Watanabe

This paper studies a specific metric on plane curves that has the property of being isometric to classical manifold (sphere, complex projective, Stiefel, Grassmann) modulo change of parametrization, each of these classical manifolds being…

Differential Geometry · Mathematics 2008-05-05 Peter W. Michor , David Mumford , Jayant Shah , Laurent Younes

We discuss the enumeration of planar graphs using bijections with suitably decorated trees, which allow for keeping track of the geodesic distances between faces of the graph. The corresponding generating functions obey non-linear recursion…

Combinatorics · Mathematics 2007-05-23 P. Di Francesco

We consider sketch vectors of geometric objects $J$ through the \mindist function \[ v_i(J) = \inf_{p \in J} \|p-q_i\| \] for $q_i \in Q$ from a point set $Q$. Collecting the vector of these sketch values induces a simple, effective, and…

Computational Geometry · Computer Science 2019-07-09 Jeff M. Phillips , Pingfan Tang

Distance Geometry is based on the inverse problem that asks to find the positions of points, in a Euclidean space of given dimension, that are compatible with a given set of distances. We briefly introduce the field, and discuss some open…

Metric Geometry · Mathematics 2016-10-04 Leo Liberti , Carlile Lavor

We introduce the heat method for computing the shortest geodesic distance to a specified subset (e.g., point or curve) of a given domain. The heat method is robust, efficient, and simple to implement since it is based on solving a pair of…

Graphics · Computer Science 2013-10-15 Keenan Crane , Clarisse Weischedel , Max Wardetzky

In Euclidean geometry, all metric notions (arc length for curves, the first fundamental form for surfaces, etc.) are derived from the Euclidean inner product on tangent vectors, and this inner product is preserved by the full symmetry group…

Differential Geometry · Mathematics 2012-05-02 Jeanne Clelland , Edward Estrada , Molly May , Jonah Miller , Sean Peneyra , Michael Schmidt

Random fields are mathematical structures used to model the spatial interaction of random variables along time, with applications ranging from statistical physics and thermodynamics to system's biology and the simulation of complex systems.…

Information Theory · Computer Science 2021-11-09 Alexandre L. M. Levada

The numerical computation of shortest paths or geodesics on surfaces, along with the associated geodesic distance, has a wide range of applications. Compared to Euclidean distance computation, these tasks are more complex due to the…

Numerical Analysis · Mathematics 2026-02-11 Hailiang Liu , Laura Zinnel

Any finite configuration of curves with minimal intersections on a surface is a configuration of shortest geodesics for some Riemannian metric on the surface. The metric can be chosen to make the lengths of these geodesics equal to the…

Geometric Topology · Mathematics 2014-10-01 Max Neumann-Coto

What is the shortest path between two data points lying in a high-dimensional space? While the answer is trivial in Euclidean geometry, it becomes significantly more complex when the data lies on a curved manifold -- requiring a Riemannian…

Machine Learning · Computer Science 2025-11-04 Louis Béthune , David Vigouroux , Yilun Du , Rufin VanRullen , Thomas Serre , Victor Boutin