Related papers: Exact Partition Function Zeros of the Wako-Saito-M…
An analytic formula for the density of states of Wako-Saito-Munoz-Eaton model, for a simple class of beta-hairpins, is obtained. Under certain simplifying assumptions on the structure of the native contacts and the values of local entropy,…
A transfer-matrix formalism is introduced to evaluate exactly the partition function of the Munoz-Eaton model, relating the folding kinetics of proteins of known structure to their thermodynamics and topology. This technique can be used for…
We calculate the exact zeros of the partition function for a continuum system where the probability distribution for the order parameter is given by two asymmetric Gaussian peaks. When the positions of the two peaks coincide, the two…
We study the collapse transition of the lattice homopolymer on a square lattice by calculating the exact partition function zeros. The exact partition function is obtained by enumerating the number of possible conformations for each energy…
The authors address the problem of downhill protein folding in the framework of a simple statistical mechanical model, which allows an exact solution for the equilibrium and a semianalytical treatment of the kinetics. Focusing on protein…
I study the partition function zeros of the Wako-Saito-Munoz-Eaton (WSME) beta hairpin model in the complex temperature plane. For various values of the entropy cost of disordering a bond, the zeros show clear locus corresponding to the…
We consider a simplified model of protein folding, with binary degrees of freedom, whose equilibrium thermodynamics is exactly solvable. Based on this exact solution, the kinetics is studied in the framework of a local equilibrium approach,…
I study the properties of the equilibrium probability distribution of a protein folding model originally introduced by Wako and Saito, and later reconsidered by Munoz and Eaton. The model is a one-dimensional model with binary variables and…
We study conformational transitions of a polymer on a simple-cubic lattice by calculating the zeros of the exact partition function, up to chain length 24. In the complex temperature plane, two loci of the partition function zeros are found…
A simple lattice model, recently introduced as a generalization of the Wako--Sait\^o model of protein folding, is used to investigate the properties of widely studied molecules under external forces. The equilibrium properties of the model…
The mechanical unfolding of proteins is investigated by extending the Wako-Saito-Munoz-Eaton model, a simplified protein model with binary degrees of freedom, which has proved successful in describing the kinetics of protein folding. Such a…
The Fukui-Todo algorithm is an important element of the array of simulational approaches to tackling critical phenomena in statistical physics. The partition-function-zero approach is of fundamental importance to understanding such…
We present a general, rigorous theory of partition function zeros for lattice spin models depending on one complex parameter. First, we formulate a set of natural assumptions which are verified for a large class of spin models in a…
We discuss the distribution of partition function zeros for the grand-canonical ensemble of the zeta-urn model, where tuning a single parameter can give a first or any higher order condensation transition. We compute the locus of zeros for…
We compute the exact partition function of the 2D Ising Model at critical temperature but with nonzero magnetic field at the boundary. The model describes a renormalization group flow between the free and fixed conformal boundary conditions…
We exactly compute the partition function for $U(2)_k\times U(2)_{-k}$ ABJM theory on $\mathbb S^3$ deformed by mass $m$ and Fayet-Iliopoulos parameter $\zeta $. For $k=1,2$, the partition function has an infinite number of Lee-Yang zeros.…
The zeros of the size-$n$ partition functions for a statistical mechanical model can be used to help understand the critical behaviour of the model as $n\to\infty$. Here we use weighted Dyck paths as a simple model of two-dimensional…
This paper is a continuation of our previous analysis [BBCKK] of partition functions zeros in models with first-order phase transitions and periodic boundary conditions. Here it is shown that the assumptions under which the results of…
In this paper, we provide the exact expression for the coefficients in the low-temperature series expansion of the partition function of the two-dimensional Ising model on the infinite square lattice. This is equivalent to exact…
A new method to extract the density of partition function zeroes (a continuous function) from their distribution for finite lattices (a discrete data set) is presented. This allows direct determination of the order and strength of phase…