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Related papers: Annihilation and coalescence on binary trees

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Rooted binary perfect phylogenies provide a generalization of rooted binary unlabeled trees in which each leaf is assigned a positive integer value that corresponds in a biological setting to the count of the number of indistinguishable…

Populations and Evolution · Quantitative Biology 2024-10-22 Chloe E. Shiff , Noah A. Rosenberg

We model the growth of a cell population using a piecewise deterministic Markov branching tree. In this model, each cell splits into two offspring at a division rate $B(x)$, which depends on its size $x$. The size of each cell increases…

Probability · Mathematics 2024-09-06 Nathalie Krell

The kinetics of single-species annihilation, $A+A\to 0$, is investigated in which each particle has a fixed velocity which may be either $\pm v$ with equal probability, and a finite diffusivity. In one dimension, the interplay between…

Condensed Matter · Physics 2009-10-28 E. Ben-Naim , S. Redner , P. L. Krapivsky

The vertices of a tree represent individuals in one of three states: ignorant, spreader, or stifler. A spreader transmits the rumor to any of its nearest ignorant neighbors at rate one. At the same rate, a spreader becomes a stifler after…

Probability · Mathematics 2025-10-08 Jhon F. Puerres , Valdivino V. Junior , Pablo M. Rodriguez

We give the asymptotic distribution of the length of partial coalescent trees for Beta and related coalescents. This allows us to give the asymptotic distribution of the number of (neutral) mutations in the partial tree. This is a first…

Probability · Mathematics 2007-06-04 Jean-François Delmas , Jean-Stéphane Dhersin , Arno Siri-Jegousse

Human diseases spread over networks of contacts between individuals and a substantial body of recent research has focused on the dynamics of the spreading process. Here we examine a model of two competing diseases spreading over the same…

Physics and Society · Physics 2015-03-19 Brian Karrer , M. E. J. Newman

One of the cornerstones in combating the HIV pandemic is being able to assess the current state and evolution of local HIV epidemics. This remains a complex problem, as many HIV infected individuals remain unaware of their infection status,…

Populations and Evolution · Quantitative Biology 2019-10-24 Pieter Libin , Nassim Versbraegen , Ana B. Abecasis , Perpetua Gomes , Tom Lenaerts , Ann Nowé

We consider a model for an epidemic in a population that occupies geographically distinct locations. The disease is spread within subpopulations by contacts between infective and susceptible individuals, and is spread between subpopulations…

Probability · Mathematics 2016-02-15 R. McVinish , P. K. Pollett , A. Shausan

We consider the problem of self-healing in peer-to-peer networks that are under repeated attack by an omniscient adversary. We assume that the following process continues for up to n rounds where n is the total number of nodes initially in…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-02-15 Tom Hayes , Navin Rustagi , Jared Saia , Amitabh Trehan

A system of particles is studied in which the stochastic processes are one-particle type-change (or one-particle diffusion) and multi-particle annihilation. It is shown that, if the annihilation rate tends to zero but the initial values of…

Statistical Mechanics · Physics 2007-05-23 Mohammad Khorrami , Amir Aghamohammadi

We investigate the statistics of trees grown from some initial tree by attaching links to preexisting vertices, with attachment probabilities depending only on the valence of these vertices. We consider the asymptotic mass distribution that…

Statistical Mechanics · Physics 2007-05-23 François David , Philippe Di Francesco , Emmanuel Guitter , Thordur Jonsson

We consider Beta$(2-\alpha, \alpha)$-coalescents with parameter range $1 <\alpha<2$ starting from $n$ leaves. The length $\ell^{(n)}_r$ of order $r$ in the $n$-Beta$(2-\alpha, \alpha)$-coalescent tree is defined as the sum of the lengths of…

Probability · Mathematics 2022-11-30 Matthias Birkner , Iulia Dahmer , Christina S. Diehl , Götz Kersting

Generating function equation has been derived for the probability distribution of the number of nodes with $k \ge 0$ outgoing lines in randomly evolving special trees. The stochastic properties of end-nodes (k=0) have been analyzed, and it…

Statistical Mechanics · Physics 2007-05-23 L. Pal

Diffusion-limited annihilation, $A+A\to 0$, and coalescence, $A+A\to A$, may both be exactly analyzed in one dimension. While the concentrations of $A$ particles in the two processes bear a simple relation, the inter-particle distribution…

Condensed Matter · Physics 2009-10-28 Pablo A. Alemany , Daniel ben-Avraham

We consider a model of a population in which individuals are sampled from different species. The Yule-Kingman nested coalescent describes the genealogy of the sample when each species merges with another randomly chosen species with a…

Probability · Mathematics 2023-12-20 Toni Gui

This paper is concerned with contact process with random vertex weights on regular trees, and study the asymptotic behavior of the critical infection rate as the degree of the trees increasing to infinity. In this model, the infection…

Probability · Mathematics 2017-03-08 Yu Pan , Dayue Chen , Xiaofeng Xue

We investigate the spatial dynamics of two disease epidemics reaching a three-species cyclic model. Regardless of their species, all individuals are susceptible to being infected with two different pathogens, which spread through…

Populations and Evolution · Quantitative Biology 2024-06-05 J. Menezes , E. Rangel

Quantifying the virality of cascades is an important question across disciplines such as the transmission of disease, the spread of information and the diffusion of innovations. An appropriate virality metric should be able to disambiguate…

Physics and Society · Physics 2022-06-29 Yafei Zhang , Lin Wang , Jonathan J. H. Zhu , Xiaofan Wang

In the critical beta-splitting model of a random $n$-leaf rooted tree, clades are recursively (from the root) split into sub-clades, and a clade of $m$ leaves is split into sub-clades containing $i$ and $m-i$ leaves with probabilities…

Probability · Mathematics 2025-04-21 David J. Aldous , Svante Janson

We study the evolution of networks when the creation and decay of links are based on the position of nodes in the network measured by their centrality. We show that the same network dynamics arises under various centrality measures, and…

Physics and Society · Physics 2013-05-29 Michael D. Koenig , Claudio J. Tessone