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Ageing's sensitivity to natural selection has long been discussed because of its apparent negative effect on individual's fitness. Thanks to the recently described (Smurf) 2-phase model of ageing we were allowed to propose a fresh angle for…

Probability · Mathematics 2019-05-17 Sylvie Méléard , Michael Rera , Tristan Roget

Lymphocyte populations, stimulated in vitro or in vivo, grow as cells divide. Stochastic models are appropriate because some cells undergo multiple rounds of division, some die, and others of the same type in the same conditions do not…

Cell Behavior · Quantitative Biology 2021-12-02 Giulia Belluccini , Martín López-García , Grant Lythe , Carmen Molina-París

Critical transitions occur in a wide variety of applications including mathematical biology, climate change, human physiology and economics. Therefore it is highly desirable to find early-warning signs. We show that it is possible to…

Dynamical Systems · Mathematics 2015-03-17 Christian Kuehn

We consider a generalization of the classical logistic growth model introducing more than one inflection point. The growth, called multi-sigmoidal, is firstly analyzed from a deterministic point of view in order to obtain the main…

Populations and Evolution · Quantitative Biology 2024-01-31 Antonio Di Crescenzo , Paola Paraggio , Patricia Román-Román , Francisco Torres-Ruiz

A stochastic comparison result that makes progress towards understanding the classical multitype contact process with unequal death rates is given. It has long been conjectured that the particle type with the largest birth to death rate…

Probability · Mathematics 2021-05-18 Joseph P. Stover

In a famous paper, Bezuidenhout and Grimmett demonstrated that the contact process dies out at the critical point.Their proof technique has often been used to study the growth of population patterns. The present text is intended as an…

Probability · Mathematics 2026-01-06 Olivier Garet

This study conducts a comparative analysis of stochastic and deterministic models to better understand the dynamics of the HIV epidemic across genders. By incorporating gender-specific transmission probabilities and treatment uptake rates,…

Populations and Evolution · Quantitative Biology 2025-01-30 Nuzhat Nuari Khan Rivu , Md Kamrujjaman , Shohel Ahmed

The simple (linear) birth-and-death process is a widely used stochastic model for describing the dynamics of a population. When the process is observed discretely over time, despite the large amount of literature on the subject, little is…

Numerical Analysis · Mathematics 2022-01-06 Alberto Pessia , Jing Tang

A method yielding simple relationships among bilateral birth-and-death processes is outlined. This allows one to relate birth and death rates of two processes in such a way that their transition probabilities, first-passage-time densities…

Probability · Mathematics 2008-03-11 Antonio Di Crescenzo

We consider contact processes on the hierarchical group, where sites infect other sites at a rate depending on their hierarchical distance, and sites become healthy with a constant recovery rate. If the infection rates decay too fast as a…

Probability · Mathematics 2009-03-02 Siva R. Athreya , Jan M. Swart

We introduce a spatial stochastic process on the lattice Z^d to model mass extinctions. Each site of the lattice may host a flock of up to N individuals. Each individual may give birth to a new individual at the same site at rate \phi until…

Probability · Mathematics 2007-05-23 Rinaldo B. Schinazi

This paper is concerned with contact process with random vertex weights on regular trees, and study the asymptotic behavior of the critical infection rate as the degree of the trees increasing to infinity. In this model, the infection…

Probability · Mathematics 2017-03-08 Yu Pan , Dayue Chen , Xiaofeng Xue

In this paper we are concerned with contact processes with random edge weights on rooted regular trees. We assign i.i.d weights on each edge on the tree and assume that an infected vertex infects its healthy neighbor at rate proportional to…

Probability · Mathematics 2016-08-03 Xiaofeng Xue

The constant rate birth--death process is a popular null model for speciation and extinction. If one removes extinct and non-sampled lineages, this process induces `reconstructed trees' which describe the relationship between extant…

Probability · Mathematics 2011-08-01 Tanja Stadler , Mike Steel

In this paper we review some results on time-homogeneous birth-death processes. Specifically, for truncated birth-death processes with two absorbing or two reflecting endpoints, we recall the necessary and sufficient conditions on the…

Probability · Mathematics 2015-09-09 Antonio Di Crescenzo , Barbara Martinucci

We exhibit a scaling law for the critical SIS stochastic epidemic: If at time 0 the population consists of square root N infected and N - square root N susceptible individuals, then when time and number currently infected are both scaled by…

Probability · Mathematics 2007-05-23 R. G. Dolgoarshinnykh Steven P. Lalley

We prove an inequality on decision trees on monotonic measures which generalizes the OSSS inequality on product spaces. As an application, we use this inequality to prove a number of new results on lattice spin models and their…

Probability · Mathematics 2018-12-27 Hugo Duminil-Copin , Aran Raoufi , Vincent Tassion

The homogeneous reconstructed evolutionary process is a birth-death process without observed extinct lineages. Each species evolves independently with the same diversification rates (speciation rate $\lambda(t)$ and extinction rate…

Populations and Evolution · Quantitative Biology 2014-02-12 Sebastian Höhna

Maximum likelihood estimators are used extensively to estimate unknown parameters of stochastic trait evolution models on phylogenetic trees. Although the MLE has been proven to converge to the true value in the independent-sample case, we…

Populations and Evolution · Quantitative Biology 2019-11-26 Lam Si Tung Ho , Vu Dinh , Frederick A. Matsen , Marc A. Suchard

We show that simple stochastic models of genome evolution lead to power law asymptotics of protein domain family size distribution. These models, called Birth, Death and Innovation Models (BDIM), represent a special class of balanced…

Genomics · Quantitative Biology 2007-05-23 Georgy P. Karev , Yuri I. Wolf , Eugene V. Koonin
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