Related papers: The Classification of Rational Subtangle Replaceme…
This paper is an introduction to rational tangles, rational knots and links and their applications to DNA. The paper can be read as an introduction to our more technical papers on rational tangles (math.GT/0311499) and on rational knots…
An important issue in classifying the rational $3$-tangle is how to know whether or not the given tangle is the trivial rational 3-tangle called $\infty$-tangle. The author\cite{1} provided a certain algorithm to detect the $\infty$-tangle.…
This paper gives two new combinatorial topological proofs of the classification of rational tangles. Each proof rests on an elegant lemma showing that rational tangles are isotopic to canonical alternating rational tangles. The first proof…
Let $F$ be an incompressible, meridionally incompressible and not boundary-parallel surface with boundary in the complement of an algebraic tangle $(B,T)$. Then $F$ separates the strings of $T$ in $B$ and the boundary slope of $F$ is…
This paper gives new and elementary combinatorial topological proofs of the classification of unoriented and oriented rational knots and links. These proofs are based on the known classification of alternating knots through flyping, and the…
We introduce the notion of rational links in the solid torus. We show that rational links in the solid torus are fully characterized by rational tangles, and hence by the continued fraction of the rational tangle. Furthermore, we generalize…
Introducing a way to modify knots using $n$-trivial rational tangles, we show that knots with given values of Vassiliev invariants of bounded degree can have arbitrary unknotting number (extending a recent result of Ohyama, Taniyama and…
The protein recombinase can change the knot type of circular DNA. The action of a recombinase converting one knot into another knot is normally mathematically modeled by band surgery. Band surgeries on a 2-bridge knot N((4mn-1)/(2m))…
Given a one-dimensional homology class in a lens space, a question related to the Berge conjecture on lens space surgeries is to determine all knots realizing the minimal rational genus of all knots in this homology class. It is known that…
We show that if the branched double cover of an alternating link arises as $p/q \in \mathbb{Q} \setminus \mathbb{Z}$ surgery on a knot in $S^3$, then this is exhibited by a rational tangle replacement in an alternating diagram.
The relationship between sequences and secondary structures or shapes in RNA exhibits robust statistical properties summarized by three notions: (1) the notion of a typical shape (that among all sequences of fixed length certain shapes are…
We study systems of $2$-tangle equations which play an important role in the analysis of enzyme actions on DNA strands. We show that every system of framed tangle equations has at most one framed rational solution. Furthermore, we show that…
Integrase proteins acting on circular double-stranded DNA often change its topology by transforming unknotted circles into torus knots and links. Two systems of tangle equations--corresponding to the two initial DNA sequences--arise when…
We consider the question of when a rational homology 3-sphere is rational homology cobordant to a connected sum of lens spaces. We prove that every rational homology cobordism class in the subgroup generated by lens spaces is represented by…
With the aim of matching a pair of instances from two different modalities, cross modality mapping has attracted growing attention in the computer vision community. Existing methods usually formulate the mapping function as the similarity…
We study tangle replacement in the context of spatial graphs. The main results show that, for certain spatial handcuff graphs, there is a one-to-one correspondence between the neighborhood equivalence classes of the spatial graphs obtained…
Families of alternating knots (links) and tangles are studied using as building block the conway defined as the twisting of two strands. The regular representation of knots assumes the projection has the minimal number of overpassings, and…
Exciting new work on the generalization bounds for neural networks (NN) given by Neyshabur et al. , Bartlett et al. closely depend on two parameter-depenedent quantities: the Lipschitz constant upper-bound and the stable rank (a softer…
In this article, we generalize the following problem, which is called the rational angle bisection problem, to the $n$-dimensional space $k^n$ over a subfield $k$ of $\mathbb R$: in the coordinate plane, for which rational numbers $a$ and…
We apply Donaldson's theorem on the intersection forms of definite 4--manifolds to characterize the lens spaces which smoothly bound rational homology 4--dimensional balls. Our result implies, in particular, that every smoothly slice…