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We study the biological evolution of low-latency natural neural networks for short-term survival, and its parallels in the development of low latency high-performance Central Processing Unit in computer design and architecture. The…

Other Computer Science · Computer Science 2024-07-15 Arifa Khan , Saravanan P , Venkatesan S. K.

Search for possible relationships between phylogeny and ontogeny is one of the most important issues in the field of evolutionary developmental biology. By representing developmental dynamics of spatially located cells with gene expression…

Populations and Evolution · Quantitative Biology 2015-04-01 Takahiro Kohsokabe , Kunihiko Kaneko

The evolution of cognition is frequently discussed as the evolution of cognitive abilities or the evolution of some neuronal structures in the brain. However, since such traits or abilities are often highly complex, understanding their…

Neurons and Cognition · Quantitative Biology 2025-06-27 Arnon Lotem , Joseph Y. Halpern

Animals behave adaptively in the environment with multiply competing goals. Understanding of the mechanisms underlying such goal-directed behavior remains a challenge for neuroscience as well for adaptive system research. To address this…

Neural and Evolutionary Computing · Computer Science 2012-04-17 Konstantin Lakhman , Mikhail Burtsev

Gene set enrichment analyses of 8,405 genes linked with 35,074 human-specific (hs) regulatory single-nucleotide changes (SNCs) revealed the staggering breadth of significant associations with morphological structures, physiological…

Genomics · Quantitative Biology 2025-12-30 Gennadi V. Glinsky

We consider a stochastic evolutionary model for a phenotype developing amongst n related species with unknown phylogeny. The unknown tree is modelled by a Yule process conditioned on n contemporary nodes. The trait value is assumed to…

Populations and Evolution · Quantitative Biology 2020-11-23 Krzysztof Bartoszek , Serik Sagitov

Gene expression levels are important molecular quantitative traits that link genotypes to molecular functions and fitness. In Drosophila, population-genetic studies in recent years have revealed substantial adaptive evolution at the genomic…

Populations and Evolution · Quantitative Biology 2015-04-06 Armita Nourmohammad , Joachim Rambeau , Torsten Held , Johannes Berg , Michael Lassig

One of the hallmark features of neocortical anatomy is the presence of extensive top-down projections into primary sensory areas, with many impinging on the distal apical dendrites of pyramidal neurons. While it is known that they exert a…

Neurons and Cognition · Quantitative Biology 2024-10-29 Nizar Islah , Guillaume Etter , Mashbayar Tugsbayar , Tugce Gurbuz , Blake Richards , Eilif Muller

The ``social brain hypothesis'' for the evolution of large brains in primates has led to evidence for the coevolution of neocortical size and social group sizes. Extrapolation of these findings to modern humans indicated that the equivalent…

Statistical Mechanics · Physics 2007-05-23 W. -X. Zhou , D. Sornette , R. A. Hill , R. I. M. Dunbar

Well protected human and laboratory animal populations with abundant resources are evolutionary unprecedented. Physical approach, which takes advantage of their extensively quantified mortality, establishes that its dominant fraction yields…

Quantitative Methods · Quantitative Biology 2007-05-23 Mark Ya. Azbel'

Human populations have experienced dramatic growth since the Neolithic revolution. Recent studies that sequenced a very large number of individuals observed an extreme excess of rare variants, and provided clear evidence of recent rapid…

Populations and Evolution · Quantitative Biology 2015-06-17 Elodie Gazave , Li Ma , Diana Chang , Alex Coventry , Feng Gao , Donna Muzny , Eric Boerwinkle , Richard Gibbs , Charles F. Sing , Andrew G. Clark , Alon Keinan

Phylostratigraphy suggests that new genes are continually born de novo from non-genic sequences, and the genes that persist found new lineages, contributing to the adaptive evolution of organisms. While recent evidence supports the view…

Populations and Evolution · Quantitative Biology 2021-10-07 Somya Mani , Tsvi Tlusty

A large repertoire of spatiotemporal activity patterns in the brain is the basis for adaptive behaviour. Understanding the mechanism by which the brain's hundred billion neurons and hundred trillion synapses manage to produce such a range…

Neurons and Cognition · Quantitative Biology 2010-10-14 Dante R. Chialvo

Walking animals, like stick insects, cockroaches or ants, demonstrate a fascinating range of locomotive abilities and complex behaviors. The locomotive behaviors can consist of a variety of walking patterns along with adaptation that allow…

Neural and Evolutionary Computing · Computer Science 2016-08-08 Sakyasingha Dasgupta , Dennis Goldschmidt , Florentin Wörgötter , Poramate Manoonpong

Many agent-based mathematical models of cranial neural crest cell (CNCC) migration impose a binary phenotypic partition of cells into either leaders or followers. In such models, the movement of leader cells at the front of collectives is…

Cell Behavior · Quantitative Biology 2026-01-13 Samuel W. S. Johnson , Ruth E. Baker , Philip K. Maini

Neocortical pyramidal neurons have many dendrites, and such dendrites are capable of, in isolation of one-another, generating a neuronal spike. It is also now understood that there is a large amount of dendritic growth during the first…

Neurons and Cognition · Quantitative Biology 2022-10-31 William B Levy , Robert A. Baxter

As a result of a hundred million years of evolution, living animals have adapted extremely well to their ecological niche. Such adaptation implies species-specific interactions with their immediate environment by processing sensory cues and…

Disordered Systems and Neural Networks · Physics 2022-04-28 Tom Birkoben , Hermann Kohlstedt

A tumor can be thought of as an ecosystem, which critically means that we cannot just consider it as a collection of mutated cells but more as a complex system of many interacting cellular and microenvironmental elements. At its simplest, a…

Populations and Evolution · Quantitative Biology 2013-05-03 Jill Gallaher , Alexander R. A. Anderson

We study a stochastic predator-prey model on a square lattice, where each of the six species has two superior and two inferior partners. The invasion probabilities between species depend on the predator-prey pair and are supplemented by…

Populations and Evolution · Quantitative Biology 2007-08-25 Matjaz Perc , Attila Szolnoki

Deep convolutional neural networks (CNNs) trained on objects and scenes have shown intriguing ability to predict some response properties of visual cortical neurons. However, the factors and computations that give rise to such ability, and…

Neurons and Cognition · Quantitative Biology 2018-06-11 Md Nasir Uddin Laskar , Luis G Sanchez Giraldo , Odelia Schwartz